RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ATP5IP56385 69 aaPredicted RBP3.26□□□□□ -1.89
BRCA1-217ENST00000487825 MRPS25P82663 173 aaKnown RBP3.26□□□□□ -1.89
BRCA1-217ENST00000487825 CAV1Q03135 178 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 RCN1Q15293 331 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 RFX4Q33E94 735 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 SOHLH1Q5JUK2 328 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 TPTE2P1Q5T6R2 138 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 TGIF2LXQ8IUE1 241 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 LAX1Q8IWV1 398 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 Q8N402 240 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 DEFB125Q8N687 156 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 LRRC75AQ8NAA5 344 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 OR52L1Q8NGH7 329 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 OR56B4Q8NH76 319 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 PFN4Q8NHR9 129 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 ACMSDQ8TDX5 336 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 CREB3L1Q96BA8 519 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF799Q96GE5 643 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 NSMCE2Q96MF7 247 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 KCTD7Q96MP8 289 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 MCHR1Q99705 422 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 PRSS27Q9BQR3 290 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 SIKE1Q9BRV8 207 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 JPT2Q9H910 190 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 SP140LQ9H930 580 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 POLR1DQ9Y2S0 133 aa3.26□□□□□ -1.89
BRCA1-217ENST00000487825 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 PRSS37A4D1T9 235 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 TRAPPC13A5PLN9 417 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 IZUMO1RA6ND01 250 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 ARRDC5A6NEK1 342 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 PRORSD1PA6NEY8 169 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 C5orf52A6NGY3 159 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 C5orf58C9J3I9 102 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 HSBP1L1C9JCN9 74 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 BUB1B-PAK6H3BSN5 160 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 RFXANKO14593 260 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 ARPC1BO15143 372 aaKnown RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 MMP23AO75900 390 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 SERPINA1P01009 418 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 IFNA4P05014 189 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 LGALS1P09382 135 aaKnown RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 CD7P09564 240 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF735P0CB33 412 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 ZCCHC18P0CG32 403 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 PTBP1P26599 531 aaKnown RBP eCLIP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OTX1P32242 354 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 S100A5P33763 92 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 SRSF9Q13242 221 aaKnown RBP eCLIP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 HES1Q14469 280 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 HLA-DRB5Q30154 266 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 CCDC153Q494R4 210 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 MESTQ5EB52 335 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 ZNF573Q86YE8 665 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 NKAIN4Q8IVV8 208 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OR6V1Q8N148 313 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 Q8N9W7 124 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OR6T1Q8NGN1 323 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OCC1Q8TAD7 63 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 SLC26A7Q8TE54 656 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 FLYWCH2Q96CP2 140 aaKnown RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OR8B4Q96RC9 309 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 OR52E6Q96RD3 313 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 SH3GL1Q99961 368 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 MICU1Q9BPX6 476 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 NRIP2Q9BQI9 281 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 HSPB9Q9BQS6 159 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 RTL8AQ9BWD3 113 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 PAPOLGQ9BWT3 736 aaKnown RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 GGTLC1Q9BX51 225 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 NDEL1Q9GZM8 345 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 FGF23Q9GZV9 251 aaPredicted RBP3.25□□□□□ -1.89
BRCA1-217ENST00000487825 MFFQ9GZY8 342 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 RAB17Q9H0T7 212 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 FN3KQ9H479 309 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 TPT1P8Q9HAU6 139 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 PLEKHA1Q9HB21 404 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 DNAJC4Q9NNZ3 241 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 SLC2A8Q9NY64 477 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 DCDC2Q9UHG0 476 aa3.25□□□□□ -1.89
BRCA1-217ENST00000487825 hCG_38984A0A1B0GV85 526 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 C5orf51A6NDU8 294 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 OR11H12B2RN74 326 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 IGLL5B9A064 214 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 K7N7A8 449 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 LGALS9O00182 355 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 XRCC2O43543 280 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 PLIN3O60664 434 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 SLC16A7O60669 478 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 SCGB2A1O75556 95 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 CIB2O75838 187 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 IGKV1D-33P01593 117 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 IGKV1-33P01594 117 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 HSPB1P04792 205 aaKnown RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 CPA3P15088 417 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 TCP1P17987 556 aaKnown RBP3.24□□□□□ -1.89
BRCA1-217ENST00000487825 CALB2P22676 271 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 GCAP28676 217 aa3.24□□□□□ -1.89
BRCA1-217ENST00000487825 CD34P28906 385 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms