RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 SLC25A33Q9BSK2 321 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 PARP12Q9H0J9 701 aaKnown RBP5.71□□□□□ -1.5
UBE4B-209ENST00000487244 RANBP3Q9H6Z4 567 aaPredicted RBP5.71□□□□□ -1.5
UBE4B-209ENST00000487244 OR2S2Q9NQN1 319 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 PLEKHJ1Q9NW61 149 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 GNG12Q9UBI6 72 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 STEAP1Q9UHE8 339 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 PITPNC1Q9UKF7 332 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 STUB1Q9UNE7 303 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 KCNK7Q9Y2U2 307 aa5.71□□□□□ -1.5
UBE4B-209ENST00000487244 AMMECR1Q9Y4X0 333 aaPredicted RBP5.71□□□□□ -1.5
UBE4B-209ENST00000487244 NOTCH3Q9UM47 2321 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 IGHV1-3A0A0C4DH29 117 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 LOC100506127A0A0U1RQW1 187 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 FAM90A9PA6NNJ1 464 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 OOSP1A8MZH6 123 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 ZNF736B4DX44 427 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 PDCD5O14737 125 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 OR2F2O95006 317 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 IGKV1D-33P01593 117 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 IGKV1-33P01594 117 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CLEC2LP0C7M8 214 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 RAB3BP20337 219 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 GALP22466 123 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 FGF9P31371 208 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 BRS3P32247 399 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 TGFBR1P36897 503 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 MNDAP41218 407 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 ZNF816Q0VGE8 651 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 HNF4GQ14541 408 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 HMGN3Q15651 99 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 ABCA11PQ4W5N1 156 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 MORN2Q502X0 79 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 ZNF880Q6PDB4 577 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 SLC16A12Q6ZSM3 486 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 SLC25A48Q6ZT89 311 aaKnown RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 LYG1Q8N1E2 194 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 LINC00311Q8N616 119 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 SETD6Q8TBK2 473 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 WIPF2Q8TF74 440 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CAPSLQ8WWF8 208 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 RTN4IP1Q8WWV3 396 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 IL1F10Q8WWZ1 152 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CREB3L1Q96BA8 519 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 RBM14Q96PK6 669 aaKnown RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CHCHD6Q9BRQ6 235 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 URM1Q9BTM9 101 aaKnown RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CENPOQ9BU64 300 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 PECRQ9BY49 303 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 ZNF696Q9H7X3 374 aa5.7□□□□□ -1.5
UBE4B-209ENST00000487244 CHMP1AQ9HD42 196 aaPredicted RBP5.7□□□□□ -1.5
UBE4B-209ENST00000487244 IGKV1-6A0A0C4DH72 117 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 LPLP06858 475 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 SCTP09683 121 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 CD28P10747 220 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 GNB3P16520 340 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 CD36P16671 472 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 SDC2P34741 201 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 OR3A3P47888 321 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 RAB7AP51149 207 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 MXD1Q05195 221 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 HES1Q14469 280 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 TRAT1Q6PIZ9 186 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 C10orf99Q6UWK7 81 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 MOB3BQ86TA1 216 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 ODF3L1Q8IXM7 274 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 OR8H3Q8N146 312 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 C8orf31Q8N9H6 132 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 TSPAN14Q8NG11 270 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 OR56B1Q8NGI3 324 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 MAFIPQ8WZ33 124 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 PRSS22Q9GZN4 317 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 IFI27L2Q9H2X8 130 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 C12orf4Q9NQ89 552 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 KCNIP1Q9NZI2 227 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 OR1A1Q9P1Q5 309 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 DAPK2Q9UIK4 370 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 JPT1Q9UK76 154 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 ELF5Q9UKW6 265 aaPredicted RBP5.69□□□□□ -1.5
UBE4B-209ENST00000487244 RAB22AQ9UL26 194 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 HSF4Q9ULV5 492 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 SSR3Q9UNL2 185 aa5.69□□□□□ -1.5
UBE4B-209ENST00000487244 A0A075B6Q4 140 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 SAA2-SAA4A0A096LPE2 208 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 TRBV6-6A0A0A6YYG2 114 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 NOTOA8MTQ0 251 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 H3BUI4 141 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 RAB27BO00194 218 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 MFNGO00587 321 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 GAPDHP04406 335 aaKnown RBP5.68□□□□□ -1.5
UBE4B-209ENST00000487244 CD3GP09693 182 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 FAM106CPP0CH98 169 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 SAA2P0DJI9 122 aaPredicted RBP5.68□□□□□ -1.5
UBE4B-209ENST00000487244 TMEM11P17152 192 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 VDAC2P45880 294 aaPredicted RBP5.68□□□□□ -1.5
UBE4B-209ENST00000487244 PSMD7P51665 324 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 ARHGDIBP52566 201 aa5.68□□□□□ -1.5
UBE4B-209ENST00000487244 ZNF137PP52743 207 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms