RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 TESK1Q15569 626 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 HLA-BQ31612 363 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF585BQ52M93 769 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 LYSMD4Q5XG99 296 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 FAM180AQ6UWF9 173 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 FAM58AQ8N1B3 248 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 OR1P1Q8NH06 330 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 LHX4Q969G2 390 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 UBE2ZQ9H832 354 aaPredicted RBP10.35□□□□□ -0.75
COL3A1-206ENST00000487010 DEPPQ9NTK1 212 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 SLC39A9Q9NUM3 307 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 PRUNE2Q8WUY3 3088 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF503-AS2A6NEH8 195 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 KBTBD11O94819 623 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 RNF224P0DH78 156 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 GZMBP10144 247 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 MEF2BQ02080 365 aaPredicted RBP10.35□□□□□ -0.75
COL3A1-206ENST00000487010 Q0VFX4 171 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 BSXQ3C1V8 233 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 CENPVQ7Z7K6 275 aaPredicted RBP10.35□□□□□ -0.75
COL3A1-206ENST00000487010 TGIF2LYQ8IUE0 185 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 RPP25LQ8N5L8 163 aaKnown RBP10.35□□□□□ -0.75
COL3A1-206ENST00000487010 TMEM9BQ9NQ34 198 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 GAB2Q9UQC2 676 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 TIMM9Q9Y5J7 89 aa10.35□□□□□ -0.75
COL3A1-206ENST00000487010 UBE2L5PA0A1B0GUS4 154 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 PINLYPA6NC86 204 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 ARGFXA6NJG6 315 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 C3orf80F5H4A9 247 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 SLC31A2O15432 143 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 IGKV1D-33P01593 117 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 IGKV1-33P01594 117 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 SPINK2P20155 84 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 FGF7P21781 194 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 FOXG1P55316 489 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 RPL23P62829 140 aaKnown RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 SLC38A11Q08AI6 406 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 COA6Q5JTJ3 125 aaKnown RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF573Q86YE8 665 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 OR1K1Q8NGR3 316 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 ACTR3CQ9C0K3 210 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 LIN7CQ9NUP9 197 aaKnown RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF16P17020 682 aaPredicted RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 GZMHP20718 246 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 NECAP1Q8NC96 275 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 POM121L2Q96KW2 1035 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 SMOC1Q9H4F8 434 aa10.34□□□□□ -0.75
COL3A1-206ENST00000487010 RYDENQ9NUL5 291 aaKnown RBP10.34□□□□□ -0.75
COL3A1-206ENST00000487010 ZNF407Q9C0G0 2248 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 TRAV39A0A0B4J263 110 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 XKRY2A2RUG3 117 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 ANKRD30BLA7E2S9 258 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM250H0YL14 139 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 LILRA1O75019 489 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 GALR1P47211 349 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 TAS2R60P59551 318 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 ERVS71-1P61550 626 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 GNG3P63215 75 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 Q6P435 159 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 TMEM14EPQ6UXP3 125 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 PPP1R32Q7Z5V6 425 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 RPUSD4Q96CM3 377 aaKnown RBP10.33□□□□□ -0.76
COL3A1-206ENST00000487010 OR5B12Q96R08 314 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 KCNS2Q9ULS6 477 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 RBM7Q9Y580 266 aaKnown RBP10.33□□□□□ -0.76
COL3A1-206ENST00000487010 MPC1Q9Y5U8 109 aa10.33□□□□□ -0.76
COL3A1-206ENST00000487010 FREM1Q5H8C1 2179 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 OR5B21A6NL26 309 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PPP5D1E7EU14 171 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 H7BYZ3 331 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 RHBDL1O75783 438 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 IGHEP01854 428 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 TUBG1P23258 451 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 APLNRP35414 380 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PLA2G5P39877 138 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PSMB3P49720 205 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 KIAA2026Q5HYC2 2103 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 ACSM6Q6P461 480 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 MOB1BQ7L9L4 216 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-206ENST00000487010 TDHQ8IZJ6 230 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PRR18Q8N4B5 295 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PKIBQ9C010 78 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 A8MWP6 167 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 NTN3O00634 580 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-206ENST00000487010 NDUFB7P17568 137 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 OTX2P32243 289 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 ARR3P36575 388 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 PDLIM4P50479 330 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 SRYQ05066 204 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 TRA2AQ13595 282 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL3A1-206ENST00000487010 P2RY6Q15077 328 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
COL3A1-206ENST00000487010 OR8G2PQ6IF36 304 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 ZNF66Q6ZN08 573 aa10.32□□□□□ -0.76
COL3A1-206ENST00000487010 TUSC5Q8IXB3 177 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms