RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 MAB21L2Q9Y586 359 aa12.14□□□□□ -0.47
POLR2J3-204ENST00000486319 ARID1AO14497 2285 aa12.14□□□□□ -0.47
POLR2J3-204ENST00000486319 FXYD6-FXYD2A0A087WZ82 144 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 TRAV38-1A0A0B4J264 116 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 ODAMA1E959 279 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 HSD17B6O14756 317 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 PHF1O43189 567 aaPredicted RBP12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 SPINT2O43291 252 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 HBZP02008 142 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 HOXB5P09067 269 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 SLC25A4P12235 298 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 CDKN1AP38936 164 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 CEACAM6P40199 344 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 CR1LQ2VPA4 569 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 FAM201AQ5SY85 155 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 ZNF788Q6ZQV5 615 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 TBC1D26Q86UD7 250 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 ZCCHC24Q8N2G6 241 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 ZNRF1Q8ND25 227 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 BVESQ8NE79 360 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 OR1L1Q8NH94 360 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 PPP1R1CQ8WVI7 109 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 TMUB1Q9BVT8 246 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 RAB9BQ9NP90 201 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 CBLN4Q9NTU7 201 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 RBM7Q9Y580 266 aaKnown RBP12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 USF3Q68DE3 2245 aa12.13□□□□□ -0.47
POLR2J3-204ENST00000486319 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 TRAV14DV4A0A0A6YYC5 116 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 PIGBOS1A0A0B4J2F0 54 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 NKX6-3A6NJ46 265 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 L7N2F9 121 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 LGALS8O00214 317 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 B3GALNT1O75752 331 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 P2RX3P56373 397 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 SP6Q3SY56 376 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 C11orf87Q6NUJ2 197 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM65Q6PI78 240 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 TPRX1Q8N7U7 411 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 OR13A1Q8NGR1 328 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 ARL11Q969Q4 196 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 GAFA1Q96PS6 74 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM106BQ9NUM4 274 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
POLR2J3-204ENST00000486319 PPIAL4EA0A075B759 164 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PPIAL4DF5H284 164 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM178BH3BS89 294 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 ARPC5O15511 151 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PPIAL4FP0DN26 164 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PSMB6P28072 239 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 HTD2P86397 168 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 UBALD1Q8TB05 177 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 TP53RKQ96S44 253 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM222Q9H0R3 208 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 UBE2J1Q9Y385 318 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PPIAL4AQ9Y536 164 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 SIGLEC5O15389 551 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PGLYRP1O75594 196 aaPredicted RBP12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 MPC2O95563 127 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 GYPAP02724 150 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 WNT2P09544 360 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 RPA2P15927 270 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 CXCL2P19875 107 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 PPOXP50336 477 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 EDDM3BP56851 147 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 LRRC37A5PQ49AS3 106 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 ZNF546Q86UE3 836 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 ZBTB34Q8NCN2 500 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 FAM216AQ8WUB2 273 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 CCL17Q92583 94 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 OR10C1Q96KK4 312 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 Q96MF0 132 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 CCL13Q99616 98 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 TMED3Q9Y3Q3 217 aa12.11□□□□□ -0.47
POLR2J3-204ENST00000486319 TEP1Q99973 2627 aaKnown RBP12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 DUXBA0A1W2PPF3 345 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 MPTX1A8MV57 137 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 H0Y980 276 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 C15orf65H3BRN8 121 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 TSC22D2O75157 780 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 PET100P0DJ07 73 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 F2RP25116 425 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 SSTR5P35346 364 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 MSMO1Q15800 293 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 IAH1Q2TAA2 248 aaPredicted RBP12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 GGNBP1Q5YKI7 109 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 OR52L2PQ8NGH6 319 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM56Q96MV1 263 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 MFFQ9GZY8 342 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 OR2S2Q9NQN1 319 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 TMEM56-RWDD3S4R434 201 aa12.1□□□□□ -0.47
POLR2J3-204ENST00000486319 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms