RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 IGLV1-47P01700 117 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 FCER2P06734 321 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 OR3A3P47888 321 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 RAB7AP51149 207 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 ACTBP60709 375 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 ACTG1P63261 375 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 SSX2Q16385 188 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 CNPY1Q3B7I2 92 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 IGSF11Q5DX21 431 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 LHFPL4Q7Z7J7 247 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 GVQW1Q8N7I0 195 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 SIGLECL1Q8N7X8 197 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 OR4P4Q8NGL7 312 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 TOMM40LQ969M1 308 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 RPEQ96AT9 228 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 MALSU1Q96EH3 234 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 CABLES2Q9BTV7 478 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 ABCB10Q9NRK6 738 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 NECAP2Q9NVZ3 263 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 OR1A1Q9P1Q5 309 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 RBM7Q9Y580 266 aaKnown RBP9.25□□□□□ -0.93
NUP50-216ENST00000486184 HILPDAQ9Y5L2 63 aa9.25□□□□□ -0.93
NUP50-216ENST00000486184 MDFIC2A0A1B0GVS7 189 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 RBBP9O75884 186 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 RCVRNP35243 200 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 TAS2R46P59540 309 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 BAMBIQ13145 260 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 PLA1AQ53H76 456 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 LY6G6FQ5SQ64 297 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 UTF1Q5T230 341 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 CCDC144NLQ6NUI1 221 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 SLC25A48Q6ZT89 311 aaKnown RBP9.24□□□□□ -0.93
NUP50-216ENST00000486184 LYG1Q8N1E2 194 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 LINC00311Q8N616 119 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 OR5H2Q8NGV7 314 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 GPX8Q8TED1 209 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 DPAGT1Q9H3H5 408 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 RDH8Q9NYR8 311 aa9.24□□□□□ -0.93
NUP50-216ENST00000486184 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
NUP50-216ENST00000486184 IGKV1D-8A0A087WSZ0 117 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 TRBV6-7A0A0A0MS04 114 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 A0A0A6YYJ9 748 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 IGKV1-6A0A0C4DH72 117 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 OOSP1A8MZH6 123 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 GABARAPH6UMI1 98 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 HSD17B6O14756 317 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 SLC31A2O15432 143 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 BRS3P32247 399 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 CDK10Q15131 360 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 LRRC75BQ2VPJ9 315 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 PYDC2Q56P42 97 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 C4orf48Q5BLP8 95 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 CT45A1Q5HYN5 189 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 TPTE2P1Q5T6R2 138 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 FAM53AQ6NSI3 398 aaPredicted RBP9.23□□□□□ -0.93
NUP50-216ENST00000486184 Q6YL49 198 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 ZNF439Q8NDP4 499 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 OR5AP2Q8NGF4 316 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 OR6Q1Q8NGQ2 317 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 OR52I2Q8NH67 350 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 CT45A3Q8NHU0 189 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 SSMEM1Q8WWF3 244 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 ABHD1Q96SE0 405 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 EHFQ9NZC4 300 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 ZNRD1Q9P1U0 126 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 ZNF221Q9UK13 617 aa9.23□□□□□ -0.93
NUP50-216ENST00000486184 ZNF736B4DX44 427 aaPredicted RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 ITGB1BP1O14713 200 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 RAB29O14966 203 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 CTDSPLO15194 276 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 TXNL1O43396 289 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 GAPDHP04406 335 aaKnown RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 CSF1P09603 554 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 OR5H8P0DN80 308 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 PTBP1P26599 531 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP50-216ENST00000486184 HLA-DMAP28067 261 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 GPR12P47775 334 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 ZNF134P52741 427 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 HILS1P60008 231 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 DGCR2P98153 550 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 SSBP1Q04837 148 aaKnown RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 ACTBL2Q562R1 376 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 LDLRAD3Q86YD5 345 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 TGIF2LXQ8IUE1 241 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 H1FOOQ8IZA3 346 aaPredicted RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 OR5R1Q8NH85 324 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 FAM216AQ8WUB2 273 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 SMIM4Q8WVI0 70 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 C17orf50Q8WW18 174 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 SNAPC3Q92966 411 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 S1PR3Q99500 378 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 SSX3Q99909 188 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 C11orf54Q9H0W9 315 aaPredicted RBP9.22□□□□□ -0.93
NUP50-216ENST00000486184 GHITMQ9H3K2 345 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 TNFRSF19Q9NS68 423 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 PTTG2Q9NZH5 202 aa9.22□□□□□ -0.93
NUP50-216ENST00000486184 PIPOXQ9P0Z9 390 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms