RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 PGA5P0DJD9 388 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 OR5H8P0DN80 308 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 PRKACAP17612 351 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 CD34P28906 385 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 GLP1RP43220 463 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 NKX2-5P52952 324 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 UCP3P55916 312 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 KRTAP10-3P60369 221 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 GMFBP60983 142 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 GNB2P62879 340 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 IL13RA1P78552 427 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 CYCSP99999 105 aaKnown RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 PRB3Q04118 309 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 FOXL1Q12952 345 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 IKZF1Q13422 519 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 ZNF146Q15072 292 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 NDUFA5Q16718 116 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 PRR31Q5SQ13 230 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 DUX4L9Q6RFH8 374 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 ZNF826PQ6ZT77 177 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 NLRC3Q7RTR2 1065 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 FAM90A1Q86YD7 464 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 POC1AQ8NBT0 407 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 SCCPDHQ8NBX0 429 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 OR2T35Q8NGX2 323 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 OR10Z1Q8NGY1 313 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 MRGPRFQ96AM1 343 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 NEIL1Q96FI4 390 aaPredicted RBP7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 NRIP2Q9BQI9 281 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 RASL12Q9NYN1 266 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 DUX4Q9UBX2 424 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 SLC23A1Q9UHI7 598 aa7.73□□□□□ -1.17
TMEM39A-208ENST00000486159 PIGBOS1A0A0B4J2F0 54 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 HMSDA8MTL9 139 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 SH2D1BO14796 132 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 TNFRSF13BO14836 293 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 DEGS1O15121 323 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 SFT2D2O95562 160 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 PTBP3O95758 552 aaKnown RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 CFHR2P36980 270 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 CD200P41217 278 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 KCNJ3P48549 501 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 DLX1P56177 255 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 AADACL3Q5VUY0 350 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 WDR25Q64LD2 544 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 ZNF660Q6AZW8 331 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 SHISA2Q6UWI4 295 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 PDZD9Q8IXQ8 264 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 FAM185AQ8N0U4 392 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 KIR3DL3Q8N743 410 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 OR52B4Q8NGK2 314 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 OR5M8Q8NGP6 311 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 COQ8AQ8NI60 647 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 GRPEL2Q8TAA5 225 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 MARCH1Q8TCQ1 289 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 CAPSLQ8WWF8 208 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 HES4Q9HCC6 221 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 CHMP1AQ9HD42 196 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 Q9N2K0 584 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 PIPOXQ9P0Z9 390 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 MIOXQ9UGB7 285 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 ZNF230Q9UIE0 474 aaPredicted RBP7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 RYR3Q15413 4870 aa7.72□□□□□ -1.17
TMEM39A-208ENST00000486159 IGHV3OR15-7A0A075B7D8 119 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 TRDCB7Z8K6 153 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 IFNL4K9M1U5 179 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 GOSR2O14653 212 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 NXPH2O95156 264 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 TFF1P04155 84 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 TK1P04183 234 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 PGAM2P15259 253 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 LMO1P25800 156 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 NPY4RP50391 375 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 PPP1R1AQ13522 171 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 ARSJQ5FYB0 599 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 Q6P435 159 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF880Q6PDB4 577 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 TREML4Q6UXN2 200 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 C9orf139Q6ZV77 190 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 RTN4RL2Q86UN3 420 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 SLC38A6Q8IZM9 456 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 GAPTQ8N292 157 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 C9orf62Q8N4C0 152 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 ASCC1Q8N9N2 400 aaKnown RBP7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 SUMF2Q8NBJ7 301 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 OR8B3Q8NGG8 313 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 OR4A4PQ8NGN8 299 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 OR8B2Q96RD0 313 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 TBX15Q96SF7 602 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 ZNF2Q9BSG1 426 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 HDHD3Q9BSH5 251 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 PCGF1Q9BSM1 259 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 DPCDQ9BVM2 203 aaPredicted RBP7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 C5orf66Q9H5L9 145 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 RAB18Q9NP72 206 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 KCNIP3Q9Y2W7 256 aa7.71□□□□□ -1.18
TMEM39A-208ENST00000486159 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
TMEM39A-208ENST00000486159 OR5H14A6NHG9 310 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms