RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 TSTD3H0UI37 97 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 C15orf65H3BRN8 121 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 M0QZK8 103 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 M0R1B8 84 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TNFRSF11BO00300 401 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TAAR5O14804 337 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 PHYHO14832 338 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 ARPC5O15511 151 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 RAD51CO43502 376 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 SUPT3HO75486 399 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 HAND1O96004 215 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 KLK3P07288 261 aaPredicted RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 MRPL3P09001 348 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 AKR1C4P17516 323 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 MYL12AP19105 171 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 F2RP25116 425 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 RPL12P30050 165 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 PYCR1P32322 319 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 RPL5P46777 297 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 TTPAP49638 278 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 FABP6P51161 128 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CDKN2DP55273 166 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TCL1AP56279 114 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 RAB25P57735 213 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 OR12D2P58182 307 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 PPP1CBP62140 327 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 PSPHP78330 225 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 ARG2P78540 354 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 IL5RAQ01344 420 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 OR7A5Q15622 319 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 HIST3H3Q16695 136 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 C4orf26Q17RF5 130 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CEACAM21Q3KPI0 293 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 SLC25A35Q3KQZ1 300 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 LIN52Q52LA3 116 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TMEM97Q5BJF2 176 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 UBE2UQ5VVX9 321 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 Q6ZR03 302 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TMEM135Q86UB9 458 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CBLN2Q8IUK8 224 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 LRRC25Q8N386 305 aaPredicted RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 GATD1Q8NB37 220 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 OR2A1Q8NGT9 310 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 KCTD4Q8WVF5 259 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 DDIT4LQ96D03 193 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 ZMYND19Q96E35 227 aaPredicted RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 ZHX1-C8orf76Q96EF9 292 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 TCEAL4Q96EI5 215 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CPNE2Q96FN4 548 aaPredicted RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 IMP4Q96G21 291 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 C20orf144Q9BQM9 153 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 PECRQ9BY49 303 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 SELENOIQ9C0D9 397 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 C20orf85Q9H1P6 137 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 MS4A6AQ9H2W1 248 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 BOLA2Q9H3K6 86 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CDC42EP4Q9H3Q1 356 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 CLMPQ9H6B4 373 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 EXOSC4Q9NPD3 245 aaKnown RBP1.98□□□□□ -2.09
VPS41-213ENST00000485955 COMMD9Q9P000 198 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 VPS29Q9UBQ0 182 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 CD84Q9UIB8 345 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 FBXO5Q9UKT4 447 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 OR51B4Q9Y5P0 310 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 LOC285556D6RIA3 1793 aa1.98□□□□□ -2.09
VPS41-213ENST00000485955 PTPRSQ13332 1948 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 CCDC171Q6TFL3 1326 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OTOGQ6ZRI0 2925 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 SYCE1LA8MT33 242 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 OR11H12B2RN74 326 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 F6UB75 175 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 K7EMT4 169 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 GABRPO00591 440 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 SLC31A2O15432 143 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 CHP2O43745 196 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 PLIN3O60664 434 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 SMIM24O75264 130 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 CNMDO75829 334 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 S1PR2O95136 353 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TFPTP0C1Z6 253 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 FOLR1P15328 257 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TAC1P20366 129 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 WARSP23381 471 aaKnown RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 CCR7P32248 378 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 SRP9P49458 86 aaKnown RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 RORCP51449 518 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TAS2R41P59536 307 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ZNF92Q03936 586 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 FMODQ06828 376 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 APOFQ13790 326 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 EDDM3AQ14507 147 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 TSNQ15631 228 aaKnown RBP1.97□□□□□ -2.09
VPS41-213ENST00000485955 ZNF726P1Q15940 193 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 LRRC26Q2I0M4 334 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 ARHGAP11BQ3KRB8 267 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 PARP15Q460N3 678 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 RAB43Q86YS6 212 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 RDH10Q8IZV5 341 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 FTMTQ8N4E7 242 aa1.97□□□□□ -2.09
VPS41-213ENST00000485955 NATD1Q8N6N6 113 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms