RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 Q9HAA7 133 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 SIX2Q9NPC8 291 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 ESM1Q9NQ30 184 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 MED9Q9NWA0 146 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 TAS2R5Q9NYW4 299 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 OR2W1Q9Y3N9 320 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 MYH7P12883 1935 aa3.69□□□□□ -1.82
RTN4-213ENST00000485749 BCORQ6W2J9 1755 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 DOCK2Q92608 1830 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 A0A087WUU8 490 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 A0A087WZ39 114 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 IGLV5-52A0A0A0MRZ9 124 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 A0A0G2JN53 185 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 IFITM5A6NNB3 132 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 FABP5P3A8MUU1 101 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 F6UB75 175 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 K7EMT4 169 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 PHOX2AO14813 284 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 CCL25O15444 150 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 SLC37A4O43826 429 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 RAMP1O60894 148 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 CRLF1O75462 422 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 REM1O75628 298 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ARL6IP5O75915 188 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ZFAND5O76080 213 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 KBTBD11O94819 623 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 OR2H2O95918 312 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 LINC00271P0C7V0 271 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 CXCL3P19876 107 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 KDELR1P24390 212 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 MPGP29372 298 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 MIPP30301 263 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 HNRNPA3P51991 378 aaKnown RBP3.68□□□□□ -1.82
RTN4-213ENST00000485749 APOC4P55056 127 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 MTPNP58546 118 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 TAS2R20P59543 309 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 SNRPFP62306 86 aaKnown RBP3.68□□□□□ -1.82
RTN4-213ENST00000485749 RPS25P62851 125 aaKnown RBP3.68□□□□□ -1.82
RTN4-213ENST00000485749 PRDX1Q06830 199 aaKnown RBP3.68□□□□□ -1.82
RTN4-213ENST00000485749 Q0VFX4 171 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 PRDX4Q13162 271 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ZNF846Q147U1 533 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 NRF1Q16656 503 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ECSCRQ19T08 205 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 CLLU1Q5K131 121 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 OLFML2AQ68BL7 652 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ZNF549Q6P9A3 640 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 STAC2Q6ZMT1 411 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 NEGR1Q7Z3B1 354 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 TMEM219Q86XT9 240 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 C20orf196Q8IYI0 205 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 OR4M1Q8NGD0 313 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 OR10D3Q8NH80 312 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 JOSD2Q8TAC2 188 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 NEIL3Q8TAT5 605 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 C11orf45Q8TAV5 145 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 FGF11Q92914 225 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 TMEM230Q96A57 120 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 KIR2DL4Q99706 377 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 NKX6-2Q9C056 277 aaPredicted RBP3.68□□□□□ -1.82
RTN4-213ENST00000485749 OR2H1Q9GZK4 316 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 OR51E2Q9H255 320 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 SRMSQ9H3Y6 488 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 SPHK2Q9NRA0 654 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 SCN3BQ9NY72 215 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 RNF7Q9UBF6 113 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ST3GAL6Q9Y274 331 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 ALS2Q96Q42 1657 aa3.68□□□□□ -1.82
RTN4-213ENST00000485749 PLIN4Q96Q06 1357 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 CICQ96RK0 1608 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 DLEC1Q9Y238 1755 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 LOC102724200A0A096LPH7 203 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 TRAV8-2A0A0B4J237 113 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 FAM236DA0A1B0GTK5 79 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 IQCMA0A1B0GVH7 501 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SIGLEC16A6NMB1 481 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SNURFLB1AK76 121 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 C9JAW5 83 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 INAFM1C9JVW0 142 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 G3V2L1 256 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 DNASE2O00115 360 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 SULT2B1O00204 365 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 UPK1AO00322 258 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 CDX4O14627 284 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 ZNF207O43670 478 aaKnown RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 ZNF354AO60765 605 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 ADRA2AP08913 450 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 FAM236CP0DP71 79 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 IL7P13232 177 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SELEP16581 610 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 ZNF708P17019 499 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 RPL7P18124 248 aaKnown RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 RCC1P18754 421 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 GGT1P19440 569 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 NTF3P20783 257 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 SHC1P29353 583 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 BLVRBP30043 206 aaPredicted RBP3.67□□□□□ -1.82
RTN4-213ENST00000485749 ATP4BP51164 291 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 BRWD1-AS2P59051 145 aa3.67□□□□□ -1.82
RTN4-213ENST00000485749 HERV-K104P61576 105 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms