RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 CNTNAP3Q9BZ76 1288 aa13.91□□□□□ -0.18
CTSA-207ENST00000484855 ARID1AO14497 2285 aa13.91□□□□□ -0.18
CTSA-207ENST00000484855 HIVEP3Q5T1R4 2406 aa13.91□□□□□ -0.18
CTSA-207ENST00000484855 DUXBA0A1W2PPF3 345 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 NKX6-3A6NJ46 265 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 BCL2L11O43521 198 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 UQCRFS1P47985 274 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 HTD2P86397 168 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 SMCO1Q147U7 214 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 ZNF672Q499Z4 452 aaPredicted RBP13.9□□□□□ -0.18
CTSA-207ENST00000484855 SLC51BQ86UW2 128 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 OR8H3Q8N146 312 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 DRAM1Q8N682 238 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 ZNF645Q8N7E2 425 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 FAM216BQ8N7L0 139 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 OR1S1Q8NH92 325 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 RBPMSQ93062 196 aaKnown RBP13.9□□□□□ -0.18
CTSA-207ENST00000484855 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 OR2D2Q9H210 308 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 OR6C3Q9NZP0 311 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 TRAV38-1A0A0B4J264 116 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 DEFB108AA8MXU0 73 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 TMEM178BH3BS89 294 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 LGALS8O00214 317 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 WNT2P09544 360 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 NUP62P37198 522 aaPredicted RBP13.9□□□□□ -0.18
CTSA-207ENST00000484855 LTC4SQ16873 150 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 CR1LQ2VPA4 569 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 C4orf17Q53FE4 359 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 CCL17Q92583 94 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 IL22RA2Q969J5 263 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 NCOR1P1Q9H4R4 102 aa13.9□□□□□ -0.18
CTSA-207ENST00000484855 LSM5Q9Y4Y9 91 aaKnown RBP13.9□□□□□ -0.18
CTSA-207ENST00000484855 SIGLEC5O15389 551 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 SERPINE2P07093 398 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 GNLYP22749 145 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 MUC15Q8N387 334 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 OR52M1Q8NGK5 317 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 RRNAD1Q96FB5 475 aaKnown RBP13.89□□□□□ -0.19
CTSA-207ENST00000484855 TMEM106BQ9NUM4 274 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 LIN7CQ9NUP9 197 aaKnown RBP13.89□□□□□ -0.19
CTSA-207ENST00000484855 RNF150Q9ULK6 438 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 PPIAL4EA0A075B759 164 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 PPIAL4DF5H284 164 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 DEDDO75618 318 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 RLN2P04090 185 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 PPIAL4FP0DN26 164 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 LOXP28300 417 aaPredicted RBP13.89□□□□□ -0.19
CTSA-207ENST00000484855 ESCO2Q56NI9 601 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 ZBTB34Q8NCN2 500 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 SPIN2AQ99865 258 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 SPIN2BQ9BPZ2 258 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 PPIAL4AQ9Y536 164 aa13.89□□□□□ -0.19
CTSA-207ENST00000484855 TMPRSS2O15393 492 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 SPDEFO95238 335 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 MBPP02686 304 aaPredicted RBP13.88□□□□□ -0.19
CTSA-207ENST00000484855 ZNF16P17020 682 aaPredicted RBP13.88□□□□□ -0.19
CTSA-207ENST00000484855 UBA52P62987 128 aaKnown RBP13.88□□□□□ -0.19
CTSA-207ENST00000484855 SWI5Q1ZZU3 235 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 TMEM204Q9BSN7 226 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 CALYQ9NYX4 217 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 GNG12Q9UBI6 72 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 JPT1Q9UK76 154 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 PIGBOS1A0A0B4J2F0 54 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 RNF212BA8MTL3 300 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 K7EPK0 472 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 VDAC1P21796 283 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 ZNF808Q8N4W9 903 aaPredicted RBP13.88□□□□□ -0.19
CTSA-207ENST00000484855 FAM71E2Q8N5Q1 922 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 GALNT11Q8NCW6 608 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 ARPC5LQ9BPX5 153 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 PLEKHF2Q9H8W4 249 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 RAB9BQ9NP90 201 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 ZFP57Q9NU63 452 aa13.88□□□□□ -0.19
CTSA-207ENST00000484855 TRGV10A0A0A0MS01 117 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 MSGN1A6NI15 193 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 ADAM20O43506 726 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 ZG16O60844 167 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 CLDN14O95500 239 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 NMSQ5H8A3 153 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 EDARADDQ8WWZ3 215 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 AQP10Q96PS8 301 aa13.87□□□□□ -0.19
CTSA-207ENST00000484855 ZNF471Q9BX82 626 aaPredicted RBP13.87□□□□□ -0.19
CTSA-207ENST00000484855 F2RL2O00254 374 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 MSMO1Q15800 293 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 THOC7Q6I9Y2 204 aaKnown RBP13.86□□□□□ -0.19
CTSA-207ENST00000484855 ALKAL2Q6UX46 152 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 ST8SIA2Q92186 375 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 C5orf30Q96GV9 206 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 PSG11Q9UQ72 335 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 IGHV1-69-2A0A0G2JMI3 117 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 ST8SIA5O15466 376 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 ST8SIA3O43173 380 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 OMGP23515 440 aa13.86□□□□□ -0.19
CTSA-207ENST00000484855 F5H0A9 414 aaPredicted RBP13.85□□□□□ -0.19
CTSA-207ENST00000484855 YPEL1O60688 119 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CGB3P0DN86 165 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 CGB7P0DN87 165 aa13.85□□□□□ -0.19
CTSA-207ENST00000484855 NDUFB7P17568 137 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms