RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 JTBO76095 146 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 CSTBP04080 98 aaKnown RBP9.8□□□□□ -0.84
UBR4-213ENST00000483922 RPSAP08865 295 aaKnown RBP9.8□□□□□ -0.84
UBR4-213ENST00000483922 IGFBP3P17936 291 aaPredicted RBP9.8□□□□□ -0.84
UBR4-213ENST00000483922 RAB40BQ12829 278 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 KLF5Q13887 457 aaPredicted RBP9.8□□□□□ -0.84
UBR4-213ENST00000483922 DDI2Q5TDH0 399 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 LINC00596Q86U02 117 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 ANKRD13BQ86YJ7 626 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 SGPP2Q8IWX5 399 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 TMEM106AQ96A25 262 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 ABHD14AQ9BUJ0 271 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 MBNL3Q9NUK0 354 aaKnown RBP9.8□□□□□ -0.84
UBR4-213ENST00000483922 ETAA1Q9NY74 926 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 STUB1Q9UNE7 303 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 VPS13DQ5THJ4 4388 aa9.8□□□□□ -0.84
UBR4-213ENST00000483922 SAA2-SAA4A0A096LPE2 208 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 SAC3D1A6NKF1 404 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 RRHO14718 337 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 PROP1O75360 226 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 RGS11O94810 467 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 SAA2P0DJI9 122 aaPredicted RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 CT45A6P0DMU7 189 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 CT45A5P0DMU8 189 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 CT45A7P0DMV0 189 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 ZIK1Q3SY52 487 aaPredicted RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 DNAL1Q4LDG9 190 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 AKIRIN2Q53H80 203 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 MEDAGQ5VYS4 303 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 RAB12Q6IQ22 244 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 GLDNQ6ZMI3 551 aaPredicted RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 PPP1R27Q86WC6 154 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 LFNGQ8NES3 379 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 OR13C5Q8NGS8 318 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 MRPL30Q8TCC3 161 aaKnown RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 FLYWCH2Q96CP2 140 aaKnown RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 RSRP1Q9BUV0 290 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 CST11Q9H112 138 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 IFI27L2Q9H2X8 130 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 TMEM138Q9NPI0 162 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 CHCHD3Q9NX63 227 aaKnown RBP9.79□□□□□ -0.84
UBR4-213ENST00000483922 PEX16Q9Y5Y5 336 aa9.79□□□□□ -0.84
UBR4-213ENST00000483922 TRAV8-7A0A075B6U6 113 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 UBE2QL1A1L167 161 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 MCRIP1C9JLW8 97 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 YPEL1O60688 119 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 FADS2O95864 444 aaKnown RBP9.78□□□□□ -0.84
UBR4-213ENST00000483922 ALPLP05186 524 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 CSN3P07498 182 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 GTF2F2P13984 249 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 LINC00205P59089 165 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 TPPP2P59282 170 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 SSBP2P81877 361 aaPredicted RBP9.78□□□□□ -0.84
UBR4-213ENST00000483922 ACTBL2Q562R1 376 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 C6orf183Q5T699 404 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 UNQ5815/PRO19632Q6UWF5 114 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 FAM131AQ6UXB0 335 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 OR52I1Q8NGK6 324 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 CPNE2Q96FN4 548 aaPredicted RBP9.78□□□□□ -0.84
UBR4-213ENST00000483922 RDH12Q96NR8 316 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 YPEL2Q96QA6 119 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 CLCC1Q96S66 551 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 TMED9Q9BVK6 235 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 ELOVL1Q9BW60 279 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 PARP12Q9H0J9 701 aaKnown RBP9.78□□□□□ -0.84
UBR4-213ENST00000483922 BANF2Q9H503 90 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 IMPAD1Q9NX62 359 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 GMPPBQ9Y5P6 360 aa9.78□□□□□ -0.84
UBR4-213ENST00000483922 ANKRD34BA5PLL1 514 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 RBMY1BA6NDE4 496 aaKnown RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 RBMY1EA6NEQ0 496 aaKnown RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 ARPC1BO15143 372 aaKnown RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 RBMXL2O75526 392 aaKnown RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 GPX5O75715 221 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 BRI3O95415 125 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 LALBAP00709 142 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 TRBV12-3P01733 135 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 IFNA6P05013 189 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 RBMY1DP0C7P1 496 aaKnown RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 BDKRB2P30411 391 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 GBX2P52951 348 aaPredicted RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 RPS11P62280 158 aaKnown RBP eCLIP9.77□□□□□ -0.85
UBR4-213ENST00000483922 HTD2P86397 168 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 TMEM30BQ3MIR4 351 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 RPL39P5Q59GN2 51 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 LY6G6FQ5SQ64 297 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 C6orf141Q5SZD1 244 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 STX19Q8N4C7 294 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 RHOXF1Q8NHV9 184 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 GPR148Q8TDV2 347 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 CENPNQ96H22 339 aaPredicted RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 ZNF184Q99676 751 aaPredicted RBP9.77□□□□□ -0.85
UBR4-213ENST00000483922 JPT1Q9UK76 154 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 ERGIC3Q9Y282 383 aa9.77□□□□□ -0.85
UBR4-213ENST00000483922 H0YJW9 148 aa9.76□□□□□ -0.85
UBR4-213ENST00000483922 ST8SIA5O15466 376 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms