RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 C15orf65H3BRN8 121 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 FGF2P09038 288 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 ARL11Q969Q4 196 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 C14orf79Q96F83 325 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 TMEM222Q9H0R3 208 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 ROS1P08922 2347 aa21.84■■□□□ 1.09
SHOX2-204ENST00000483851 KCNAB3O43448 404 aa21.83■■□□□ 1.09
SHOX2-204ENST00000483851 HSD17B13Q7Z5P4 300 aaPredicted RBP21.83■■□□□ 1.09
SHOX2-204ENST00000483851 ZBTB34Q8NCN2 500 aa21.83■■□□□ 1.09
SHOX2-204ENST00000483851 BARX1Q9HBU1 254 aaPredicted RBP21.83■■□□□ 1.09
SHOX2-204ENST00000483851 OR5AC2Q9NZP5 309 aa21.83■■□□□ 1.09
SHOX2-204ENST00000483851 PFDN2Q9UHV9 154 aa21.83■■□□□ 1.09
SHOX2-204ENST00000483851 KIAA2026Q5HYC2 2103 aa21.83■■□□□ 1.09
SHOX2-204ENST00000483851 HSD17B6O14756 317 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 PHF1O43189 567 aaPredicted RBP21.83■■□□□ 1.08
SHOX2-204ENST00000483851 FSTL3O95633 263 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 CRYZL1O95825 349 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 TGIF2LYQ8IUE0 185 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 TPRX1Q8N7U7 411 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 DEFB108BQ8NET1 73 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 LRRC20Q8TCA0 184 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 CYTL1Q9NRR1 136 aa21.83■■□□□ 1.08
SHOX2-204ENST00000483851 IGHV1-69-2A0A0G2JMI3 117 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 PGLYRP1O75594 196 aaPredicted RBP21.82■■□□□ 1.08
SHOX2-204ENST00000483851 GYPAP02724 150 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 HOXB5P09067 269 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 CCL17Q92583 94 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 C18orf12Q96KH6 178 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 TMEM56Q96MV1 263 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 AQP10Q96PS8 301 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 DCAF16Q9NXF7 216 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 TMEM56-RWDD3S4R434 201 aa21.82■■□□□ 1.08
SHOX2-204ENST00000483851 DUXBA0A1W2PPF3 345 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 F5H0A9 414 aaPredicted RBP21.81■■□□□ 1.08
SHOX2-204ENST00000483851 H0Y980 276 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 RAB32Q13637 225 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 SP6Q3SY56 376 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 TP53RKQ96S44 253 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 CCL13Q99616 98 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 RBM7Q9Y580 266 aaKnown RBP21.81■■□□□ 1.08
SHOX2-204ENST00000483851 NDUFA2O43678 99 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 CGB3P0DN86 165 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 CGB7P0DN87 165 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 ZP3P21754 424 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 EDDM3BP56851 147 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 FAM74A1Q5RGS3 127 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 IL22RA2Q969J5 263 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 OR2S2Q9NQN1 319 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 CBLN4Q9NTU7 201 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 JPT1Q9UK76 154 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 UBE2J1Q9Y385 318 aaPredicted RBP21.81■■□□□ 1.08
SHOX2-204ENST00000483851 TMED3Q9Y3Q3 217 aa21.81■■□□□ 1.08
SHOX2-204ENST00000483851 ADGRG4Q8IZF6 3080 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 MSGN1A6NI15 193 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 F2RL2O00254 374 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 F2RP25116 425 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 UCP1P25874 307 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 SSTR5P35346 364 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 TMEM30BQ3MIR4 351 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 UBALD1Q8TB05 177 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 NARFLQ9H6Q4 476 aa21.8■■□□□ 1.08
SHOX2-204ENST00000483851 TNFRSF13BO14836 293 aaPredicted RBP21.79■■□□□ 1.08
SHOX2-204ENST00000483851 HFEQ30201 348 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 GGNBP1Q5YKI7 109 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 OR52L2PQ8NGH6 319 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 CORO2AQ92828 525 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 NUP50Q9UKX7 468 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 RAI1Q7Z5J4 1906 aaPredicted RBP21.79■■□□□ 1.08
SHOX2-204ENST00000483851 CDS2O95674 445 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 IGLV2-14P01704 120 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 OR8U9P0C7N5 309 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 ZNF645Q8N7E2 425 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 OR8U1Q8NH10 309 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 EDARADDQ8WWZ3 215 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 LINC00052Q96N35 136 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 KAAG1Q9UBP8 84 aa21.79■■□□□ 1.08
SHOX2-204ENST00000483851 TRGV10A0A0A0MS01 117 aa21.78■■□□□ 1.08
SHOX2-204ENST00000483851 PET100P0DJ07 73 aa21.78■■□□□ 1.08
SHOX2-204ENST00000483851 LINC00574Q9H8X3 128 aa21.78■■□□□ 1.08
SHOX2-204ENST00000483851 PKDREJQ9NTG1 2253 aa21.78■■□□□ 1.08
SHOX2-204ENST00000483851 RNF212BA8MTL3 300 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 B8ZZF3 427 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 TMPRSS2O15393 492 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 YPEL1O60688 119 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 IGFBP2P18065 325 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 IAH1Q2TAA2 248 aaPredicted RBP21.77■■□□□ 1.08
SHOX2-204ENST00000483851 FAM216BQ8N7L0 139 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 CNTNAP3BQ96NU0 1288 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 YPEL2Q96QA6 119 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 DCTN5Q9BTE1 182 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 CNTNAP3Q9BZ76 1288 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 RAB1BQ9H0U4 201 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 SELLP14151 372 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 MEF2CQ06413 473 aaPredicted RBP21.77■■□□□ 1.08
SHOX2-204ENST00000483851 CALYQ9NYX4 217 aa21.77■■□□□ 1.08
SHOX2-204ENST00000483851 USP24Q9UPU5 2620 aa21.77■■□□□ 1.07
SHOX2-204ENST00000483851 DSCAML1Q8TD84 2053 aa21.76■■□□□ 1.07
SHOX2-204ENST00000483851 ZNF695Q8IW36 515 aa21.76■■□□□ 1.07
SHOX2-204ENST00000483851 PARP12Q9H0J9 701 aaKnown RBP21.76■■□□□ 1.07
SHOX2-204ENST00000483851 ZFP57Q9NU63 452 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms