RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 C7orf66A4D0T2 115 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 SLC31A2O15432 143 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 PEX14O75381 377 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 LIPFP07098 398 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 PI3P19957 117 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 USF1P22415 310 aaPredicted RBP6.75□□□□□ -1.33
USP4-210ENST00000483212 GNRHRP30968 328 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 RAB25P57735 213 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 FXYD4P59646 89 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 DHODHQ02127 395 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
USP4-210ENST00000483212 CT45A1Q5HYN5 189 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 CD276Q5ZPR3 534 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 SLC25A42Q86VD7 318 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 KIR3DL3Q8N743 410 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 ADAD2Q8NCV1 583 aaKnown RBP6.75□□□□□ -1.33
USP4-210ENST00000483212 CT45A3Q8NHU0 189 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 ZNF596Q8TC21 504 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 FAM216AQ8WUB2 273 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 LEAP2Q969E1 77 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 TOMM40LQ969M1 308 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 ALX4Q9H161 411 aaPredicted RBP6.75□□□□□ -1.33
USP4-210ENST00000483212 IFI27L2Q9H2X8 130 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 GHITMQ9H3K2 345 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 RAB9BQ9NP90 201 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 MMP26Q9NRE1 261 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 CCL28Q9NRJ3 127 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 ITPR2Q14571 2701 aa6.75□□□□□ -1.33
USP4-210ENST00000483212 ARID1AO14497 2285 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 FAM172BPA6NC97 362 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 M0R1W7 72 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 ST8SIA5O15466 376 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 HSPA12AO43301 675 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 ENSAO43768 121 aaKnown RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 PROP1O75360 226 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 FOXH1O75593 365 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 IL5P05113 134 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 OR8U9P0C7N5 309 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 MMP9P14780 707 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 PGAM2P15259 253 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 CD34P28906 385 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 DLX1P56177 255 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 HERV-K104P61576 105 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 RND3P61587 244 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 SUPT4H1P63272 117 aaKnown RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 LCN2P80188 198 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 LOXL1Q08397 574 aaPredicted RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 MSMO1Q15800 293 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 TATDN3Q17R31 274 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 Q3ZCU0 254 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 HCP5Q6MZN7 132 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 GLDNQ6ZMI3 551 aaPredicted RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 ZNF818PQ6ZRF7 136 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 C1orf229Q6ZS94 237 aaPredicted RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 TMED4Q7Z7H5 227 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 ODF3L1Q8IXM7 274 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 SLC38A6Q8IZM9 456 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 C8orf31Q8N9H6 132 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 BVESQ8NE79 360 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 OR8U1Q8NH10 309 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 CAPSLQ8WWF8 208 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 TNFRSF14Q92956 283 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 ZNF486Q96H40 463 aaPredicted RBP6.74□□□□□ -1.33
USP4-210ENST00000483212 FOXC2Q99958 501 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 BEX2Q9BXY8 128 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 SLC5A7Q9GZV3 580 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 SIRPDQ9H106 197 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 BEX1Q9HBH7 125 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 GNG12Q9UBI6 72 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 GAB2Q9UQC2 676 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 ALG5Q9Y673 324 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 SESN1Q9Y6P5 492 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 KIAA2026Q5HYC2 2103 aa6.74□□□□□ -1.33
USP4-210ENST00000483212 A0A0A6YYJ9 748 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 A0A1W2PPH5 198 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 CRYM-AS1A6NIL9 109 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 GPR31O00270 319 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 PRAF2O60831 178 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 RGS11O94810 467 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 IGHV3-7P01780 117 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 RLN1P04808 185 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 OR4E1P0C645 316 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 NFYBP25208 207 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 LUMP51884 338 aaPredicted RBP6.73□□□□□ -1.33
USP4-210ENST00000483212 UBE2MP61081 183 aaKnown RBP6.73□□□□□ -1.33
USP4-210ENST00000483212 PPP1R1AQ13522 171 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 XP32Q5T750 250 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 LPCAT3Q6P1A2 487 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 FAHD2BQ6P2I3 314 aaPredicted RBP6.73□□□□□ -1.33
USP4-210ENST00000483212 C1orf122Q6ZSJ8 110 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 CADM3Q8N126 398 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 LINC00311Q8N616 119 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 DRAM1Q8N682 238 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 ZNF645Q8N7E2 425 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 OR52B4Q8NGK2 314 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 ZFAND1Q8TCF1 268 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 SECTM1Q8WVN6 248 aa6.73□□□□□ -1.33
USP4-210ENST00000483212 EDARADDQ8WWZ3 215 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms