RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 ZNF439Q8NDP4 499 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 OR10V1Q8NGI7 309 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 OR6Q1Q8NGQ2 317 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 OR52N1Q8NH53 320 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 OR5AK2Q8NH90 309 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 NEK7Q8TDX7 302 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 CASTOR1Q8WTX7 329 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 TSEN15Q8WW01 171 aaKnown RBP5.7□□□□□ -1.5
CSDE1-206ENST00000483030 CPNE2Q96FN4 548 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-206ENST00000483030 OR4C12Q96R67 309 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 PDCD1LG2Q9BQ51 273 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 GABARAPL3Q9BY60 117 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 TOLLIPQ9H0E2 274 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 GABARAPL1Q9H0R8 117 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 GHITMQ9H3K2 345 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 ISG20L2Q9H9L3 353 aaKnown RBP5.7□□□□□ -1.5
CSDE1-206ENST00000483030 IMPAD1Q9NX62 359 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 GNG12Q9UBI6 72 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 DHDHQ9UQ10 334 aa5.7□□□□□ -1.5
CSDE1-206ENST00000483030 DNAH1Q9P2D7 4330 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 SORL1Q92673 2214 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 IGHV4OR15-8A0A075B7B6 117 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 A0A087WW49 117 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 IGHV7-81A0A0B4J1V7 117 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 TMEM212A6NML5 194 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 C12orf77C9JDV5 145 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 E9PI62 339 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 AIPO00170 330 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 RGS13O14921 159 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 SPINT2O43291 252 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 CSTBP04080 98 aaKnown RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 M6PRP20645 277 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 BLVRBP30043 206 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 SOX2P48431 317 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 VEGFCP49767 419 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 RBM11P57052 281 aaKnown RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ACTBP60709 375 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 LSAMPQ13449 338 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 SYT6Q5T7P8 510 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF529Q6P280 563 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF497Q6ZNH5 498 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF554Q86TJ5 538 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 HAPLN4Q86UW8 402 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 PRR18Q8N4B5 295 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 STX19Q8N4C7 294 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 MINDY2Q8NBR6 621 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 BVESQ8NE79 360 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 OR1L1Q8NH94 360 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 TRUB1Q8WWH5 349 aaKnown RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 SLC7A6OSQ96CW6 309 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF251Q9BRH9 671 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ALG8Q9BVK2 526 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ANKRD60Q9BZ19 345 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 METTL9Q9H1A3 318 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 TPSG1Q9NRR2 321 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 TAS2R4Q9NYW5 299 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 NDUFA13Q9P0J0 144 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 NKX1-2Q9UD57 310 aaPredicted RBP5.69□□□□□ -1.5
CSDE1-206ENST00000483030 AASSQ9UDR5 926 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 TRAPPC2LQ9UL33 140 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 ERGIC3Q9Y282 383 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 AP4S1Q9Y587 144 aa5.69□□□□□ -1.5
CSDE1-206ENST00000483030 A0A1W2PN81 502 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 A0A1W2PP11 408 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 LANCL1O43813 399 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 SOX15O60248 233 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 CLN5O75503 358 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 IGHV3-11P01762 117 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 HLA-DRB1P01911 266 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 HBZP02008 142 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 HSPB1P04792 205 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 LGALS1P09382 135 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 OR8U9P0C7N5 309 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 SERPINA2P20848 420 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 MAPK3P27361 379 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 ZNF93P35789 620 aaPredicted RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 CHRNA7P36544 502 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 ADARB1P78563 741 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 PITPNAQ00169 270 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 COTL1Q14019 142 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 ECSCRQ19T08 205 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 C5orf64Q2M2E5 130 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 MPV17LQ2QL34 196 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 SLC22A6Q4U2R8 563 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 NHLRC3Q5JS37 347 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 SLC25A30Q5SVS4 291 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 MEDAGQ5VYS4 303 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 STEAP3Q658P3 488 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 AKAP14Q86UN6 197 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 STX12Q86Y82 276 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 SYS1Q8N2H4 156 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 OR4K15Q8NH41 348 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 LGALS12Q96DT0 336 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 MRPL48Q96GC5 212 aaKnown RBP5.68□□□□□ -1.5
CSDE1-206ENST00000483030 S100A13Q99584 98 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 C9orf16Q9BUW7 83 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 JAM3Q9BX67 310 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 OR2S2Q9NQN1 319 aa5.68□□□□□ -1.5
CSDE1-206ENST00000483030 C19orf73Q9NVV2 129 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms