RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 VSIG8P0DPA2 414 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 RPS27AP62979 156 aaKnown RBP10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 DGCR2P98153 550 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 GNMTQ14749 295 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 SPHARQ15513 63 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 MED22Q15528 200 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 C1orf100Q5SVJ3 147 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 C6orf141Q5SZD1 244 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 OR10K2Q6IF99 312 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 CEACAM19Q7Z692 300 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 LRRTM1Q86UE6 522 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 RNF152Q8N8N0 203 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 OR2AK2Q8NG84 335 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 OR5M8Q8NGP6 311 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 NRG4Q8WWG1 115 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 KCTD7Q96MP8 289 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 DUX3Q96PT4 197 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 HSPB9Q9BQS6 159 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 SULT4A1Q9BR01 284 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 FAAP24Q9BTP7 215 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 TMED9Q9BVK6 235 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 TMEM59Q9BXS4 323 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 STEAP1Q9UHE8 339 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 ZNF580Q9UK33 172 aa10.54□□□□□ -0.72
CTDSP1-208ENST00000482272 RAMP3O60896 148 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 SLC2A2P11168 524 aaPredicted RBP10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 CHATP28329 748 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 HTR2CP28335 458 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 ACTBP60709 375 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 CFHR3Q02985 330 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 CD69Q07108 199 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 HMGN3Q15651 99 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 HSD17B12Q53GQ0 312 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 TMEM65Q6PI78 240 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 ODF3L1Q8IXM7 274 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 NABP2Q9BQ15 211 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 CHMP1AQ9HD42 196 aaPredicted RBP10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 PLEKHJ1Q9NW61 149 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 PIPOXQ9P0Z9 390 aa10.53□□□□□ -0.72
CTDSP1-208ENST00000482272 BPNT1O95861 308 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 MYF6P23409 242 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 BLVRBP30043 206 aaPredicted RBP10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 DEFB136Q30KP8 78 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 C9orf66Q5T8R8 295 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 LIN54Q6MZP7 749 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 ZNF833PQ6ZTB9 187 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 C6orf201Q7Z4U5 140 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 SETD6Q8TBK2 473 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 IL1F10Q8WWZ1 152 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 GFI1Q99684 422 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 URM1Q9BTM9 101 aaKnown RBP10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 OR51J1Q9H342 316 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 GHITMQ9H3K2 345 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 RIMS4Q9H426 269 aaPredicted RBP10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 KIAA1456Q9P272 454 aa10.52□□□□□ -0.73
CTDSP1-208ENST00000482272 DNAH9Q9NYC9 4486 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 A0A0A6YYD4 124 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 RAB29O14966 203 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 SLC22A1O15245 554 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 NBR2O15453 112 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 HLA-DRB1P01911 266 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 UCHL1P09936 223 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 CD37P11049 281 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 PSMB8P28062 276 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 AQP4P55087 323 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 UNC119Q13432 240 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 IRF3Q14653 427 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 FAM71F2Q6NXP2 309 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 NPBQ8NG41 125 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 OR11H1Q8NG94 326 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 OR6M1Q8NGM8 313 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 UFD1Q92890 307 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 RITA1Q96K30 269 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 UBE2E2Q96LR5 201 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 B9D2Q9BPU9 175 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 NICN1Q9BSH3 213 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 MRPL20Q9BYC9 149 aaKnown RBP10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 ANKRD60Q9BZ19 345 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 TPRKBQ9Y3C4 175 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 WSB1Q9Y6I7 421 aa10.51□□□□□ -0.73
CTDSP1-208ENST00000482272 SAA2-SAA4A0A096LPE2 208 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 TMEM14DPA8MWL7 114 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 NAPSAO96009 420 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 SAA2P0DJI9 122 aaPredicted RBP10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 ARSBP15848 533 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 PPIFP30405 207 aaKnown RBP10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 MC5RP33032 325 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 RANBP1P43487 201 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 OR3A3P47888 321 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 QRFPP83859 136 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 TRAM1Q15629 374 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 LIPKQ5VXJ0 399 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 TMEM203Q969S6 136 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 PLGRKTQ9HBL7 147 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 SLC23A1Q9UHI7 598 aa10.5□□□□□ -0.73
CTDSP1-208ENST00000482272 MGAT4AQ9UM21 535 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms