RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 PAGE3Q5JUK9 113 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 PTAR1Q7Z6K3 402 aaPredicted RBP3.17□□□□□ -1.9
VPS41-212ENST00000482217 TMEM86AQ8N2M4 240 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 FAM71E2Q8N5Q1 922 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 DCAF4L2Q8NA75 395 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 TMEM178AQ8NBL3 297 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 OR10J6PQ8NGY7 276 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 OR10G6Q8NH81 332 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ZNRF4Q8WWF5 429 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ARL11Q969Q4 196 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ZNF524Q96C55 264 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ROPN1LQ96C74 230 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 CNRIP1Q96F85 164 aaPredicted RBP3.17□□□□□ -1.9
VPS41-212ENST00000482217 CARD19Q96LW7 228 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 TRIB3Q96RU7 358 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 LINC01587Q99440 93 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 PDCD10Q9BUL8 212 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 LRRC61Q9BV99 259 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 TMEM147Q9BVK8 224 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 OR51I2Q9H344 312 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 XCL2Q9UBD3 114 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 TRAPPC2LQ9UL33 140 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 SIGLEC7Q9Y286 467 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ZFP30Q9Y2G7 519 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 ERICH3Q5RHP9 1530 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 DNMBPQ6XZF7 1577 aa3.17□□□□□ -1.9
VPS41-212ENST00000482217 SETD1AO15047 1707 aaKnown RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 NUP210Q8TEM1 1887 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 SMIM26A0A096LP01 95 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 TEX48A0A1B0GUV7 120 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SPAARA0A1B0GVQ0 90 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PMS2P5A8MQ11 134 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 C9JAW5 83 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 I3L4J1 428 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 CORTO00230 105 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 COPEO14579 308 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PGLYRP1O75594 196 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 CA2P00918 260 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PTHP01270 115 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 IGHG2P01859 326 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 APOA2P02652 100 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 CNTFRP26992 372 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 GABRA2P47869 451 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 LINC01547P58512 204 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 C1QTNF8P60827 252 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SNRPD2P62316 118 aaKnown RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 PPP3R1P63098 170 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 HLA-DRB3P79483 266 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PAX8Q06710 450 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 BTN1A1Q13410 526 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 FZD2Q14332 565 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 RHEBQ15382 184 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SIX1Q15475 284 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 CCL14Q16627 93 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 NRF1Q16656 503 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 C12orf74Q32Q52 190 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 KIAA1644Q3SXP7 199 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 CENPWQ5EE01 88 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 GLYATL3Q5SZD4 288 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 IBA57Q5T440 356 aaKnown RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 TEX261Q6UWH6 196 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 IL34Q6ZMJ4 242 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 CLEC20AQ6ZU45 233 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 FAM19A3Q7Z5A8 133 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SGPP2Q8IWX5 399 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 C9orf40Q8IXQ3 194 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PDZD9Q8IXQ8 264 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 OR4E2Q8NGC2 313 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 OR2A12Q8NGT7 310 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 PLEKHB2Q96CS7 222 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 AURKBQ96GD4 344 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 SLC25A31Q9H0C2 315 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 OR2D2Q9H210 308 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 EDA2RQ9HAV5 297 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SDF2L1Q9HCN8 221 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SIX2Q9NPC8 291 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SLCO1B3Q9NPD5 702 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 GPR84Q9NQS5 396 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SPHK2Q9NRA0 654 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 MMP26Q9NRE1 261 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 HIGD1AQ9Y241 93 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 SSH2Q76I76 1423 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 ATG2BQ96BY7 2078 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 BCORL1Q5H9F3 1711 aa3.16□□□□□ -1.9
VPS41-212ENST00000482217 MAGI1Q96QZ7 1491 aaPredicted RBP3.16□□□□□ -1.9
VPS41-212ENST00000482217 ZCCHC11Q5TAX3 1644 aaKnown RBP3.15□□□□□ -1.9
VPS41-212ENST00000482217 TCF20Q9UGU0 1960 aaKnown RBP3.15□□□□□ -1.91
VPS41-212ENST00000482217 IGKV1-8A0A0C4DH67 115 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 DUXBA0A1W2PPF3 345 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 FABP5P3A8MUU1 101 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 K7EQG2 157 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 K7N7A8 449 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 M0R143 59 aa3.15□□□□□ -1.91
VPS41-212ENST00000482217 OR7C2O60412 319 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms