RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 C10orf107Q8IVU9 208 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 LRRC25Q8N386 305 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 OR10K1Q8NGX5 313 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 PSMF1Q92530 271 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 OLFM3Q96PB7 478 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ZNF430Q9H8G1 570 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 RHOFQ9HBH0 211 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 C14orf166Q9Y224 244 aaKnown RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 PKIGQ9Y2B9 76 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 SCN2AQ99250 2005 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ASCC3Q8N3C0 2202 aaKnown RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 SMIM23A6NLE4 172 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TRIM49D1C9J1S8 452 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 I3L4J1 428 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 XKRYO14609 159 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 AGPAT2O15120 278 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TTC4O95801 387 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ADRB3P13945 408 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 DAOP14920 347 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 PSG4Q00888 419 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 C1orf195Q5TG92 126 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 FBXW9Q5XUX1 488 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 NEGR1Q7Z3B1 354 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 PHF13Q86YI8 300 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 CSNK1G2-AS1Q8NCQ2 148 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 S100PBPQ96BU1 408 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 RCN3Q96D15 328 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 RNF157Q96PX1 679 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 GPR21Q99679 349 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 SLC2A9Q9NRM0 540 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 C19orf12Q9NSK7 152 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 IGLV4-3A0A075B6K6 122 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 FAM159BA6NKW6 160 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 CLDN24A6NM45 220 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TNFSF13O75888 250 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TFPTP0C1Z6 253 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 ZNF133P52736 654 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 S100A12P80511 92 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 PYCR3Q53H96 274 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 SLC25A30Q5SVS4 291 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 NT5DC3Q86UY8 548 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 OR2Z1Q8NG97 314 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 GTSF1Q8WW33 167 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 RGP1Q92546 391 aaPredicted RBP2.44□□□□□ -2.02
SMC6-208ENST00000481708 IP6K3Q96PC2 410 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 GNB4Q9HAV0 340 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 MGAT4AQ9UM21 535 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 GINS2Q9Y248 185 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 TMEM56-RWDD3S4R434 201 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 CNTRLQ7Z7A1 2325 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 MTORP42345 2549 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 HSPG2P98160 4391 aa2.44□□□□□ -2.02
SMC6-208ENST00000481708 K7EM74 188 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ZNF780AO75290 641 aaPredicted RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 KBTBD11O94819 623 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 CFC1BP0CG36 223 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SERPINB1P30740 379 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 CA7P43166 264 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GZMMP51124 257 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 RPS23P62266 143 aaKnown RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 CXCL6P80162 114 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 RBMY1FQ15415 496 aaKnown RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 GUCA2BQ16661 112 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 METTL21CQ5VZV1 264 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TMEM135Q86UB9 458 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TGIF2LYQ8IUE0 185 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 Q8NBF4 154 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 Q8WTZ3 238 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ITLN1Q8WWA0 313 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ASB17Q8WXJ9 295 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 KLK6Q92876 244 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GABARAPL3Q9BY60 117 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 RNASE7Q9H1E1 156 aaKnown RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 RAB26Q9ULW5 256 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.43□□□□□ -2.02
SMC6-208ENST00000481708 PCNX2A6NKB5 2137 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 LRP1BQ9NZR2 4599 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 SNAPINO95295 136 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 CRHP06850 196 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 GKN3PP0CG01 181 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 NELFEP18615 380 aaKnown RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 F8A1P23610 371 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 CXCR1P25024 350 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 AP2S1P53680 142 aaPredicted RBP2.43□□□□□ -2.02
SMC6-208ENST00000481708 KRTAP27-1Q3LI81 207 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 OR10K2Q6IF99 312 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 FAM19A3Q7Z5A8 133 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 RAB42Q8N4Z0 105 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 EEF1AKMT1Q8WVE0 214 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 EDA2RQ9HAV5 297 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 PRO0628Q9UI54 55 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 PSG8Q9UQ74 426 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ERGIC3Q9Y282 383 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 UFC1Q9Y3C8 167 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ORC6Q9Y5N6 252 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 FABP7O15540 132 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 RDH16O75452 317 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 TRBV12-3P01733 135 aa2.43□□□□□ -2.02
SMC6-208ENST00000481708 ICAM2P13598 275 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms