RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 CRHP06850 196 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 COL9A1P20849 921 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 PCSK4Q6UW60 755 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 TMEM70Q9BUB7 260 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 PRDX2P32119 198 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 SNRPEP62304 92 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 ABHD1Q96SE0 405 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 ZDHHC8Q9ULC8 765 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 ZNF502Q8TBZ5 544 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 RSG1Q9BU20 258 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 NPVFQ9HCQ7 196 aa11.32□□□□□ -0.6
CACNA1D-206ENST00000481478 SELENOPP49908 381 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 EWSR1Q01844 656 aaKnown RBP eCLIP11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PLAURQ03405 335 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 GGTLC2Q14390 218 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PRSS8Q16651 343 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PRNTQ86SH4 94 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 LEUTXA8MZ59 168 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 MESTQ5EB52 335 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 ZNF519Q8TB69 540 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 ELOVL1Q9BW60 279 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 FFAR1O14842 300 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PAGE4O60829 102 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 JOSD1Q15040 202 aaPredicted RBP11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 LDLRAD3Q86YD5 345 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 YBX2Q9Y2T7 364 aaKnown RBP11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 F5P12259 2224 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 SNURFLB1AK76 121 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 MDP1Q86V88 176 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 LRRC75AQ8NAA5 344 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 RNF133Q8WVZ7 376 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 IGHV5-10-1A0A0J9YXX1 117 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PITX3O75364 302 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 SERF2P84101 59 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 COL10A1Q03692 680 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 PGLYRP3Q96LB9 341 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 MARVELD1Q9BSK0 173 aa11.31□□□□□ -0.6
CACNA1D-206ENST00000481478 OR4C46A6NHA9 309 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 DLL1O00548 723 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 SEC11BP0C7V7 166 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 IL9P15248 144 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 RNFT1Q5M7Z0 435 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 PRSS41Q7RTY9 318 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 PATJQ8NI35 1801 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 AWAT1Q58HT5 328 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 CBLN3Q6UW01 205 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 MRGPRFQ96AM1 343 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 TTTY12Q9BZ98 90 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 HIKESHIQ53FT3 197 aa11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 RPP25Q9BUL9 199 aaKnown RBP11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 HINT1P49773 126 aaPredicted RBP11.3□□□□□ -0.6
CACNA1D-206ENST00000481478 PRR33A8MZF0 331 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 MPZL1O95297 269 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CT62P0C5K7 136 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 MFAP4P55083 255 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 DLK1P80370 383 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 A0A1W2PPV9 198 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 TCRBV16S1A1N1A0A5B0 115 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CEACAM18A8MTB9 384 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 SEZ6L2Q6UXD5 910 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 ZG16BQ96DA0 208 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CCL3P10147 92 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CCL4P13236 92 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 LGALS3P17931 250 aaKnown RBP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 IER3P46695 156 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 PDLIM4P50479 330 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 C3AR1Q16581 482 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 UNQ9370/PRO34162Q6UXP9 181 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 GVQW1Q8N7I0 195 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 SDK1Q7Z5N4 2213 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 LMX1BO60663 402 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CLDN14O95500 239 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 PF4P02776 101 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 BGLAPP02818 100 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 TMEM50BP56557 158 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 RELQ04864 619 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 TREM2Q9NZC2 230 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 SPAARA0A1B0GVQ0 90 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CA2P00918 260 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 CD74P04233 296 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 DDA1Q9BW61 102 aa11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 FOXD3Q9UJU5 478 aaPredicted RBP11.29□□□□□ -0.6
CACNA1D-206ENST00000481478 A0A1B0GTH9 108 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A10PA6NDY2 464 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A18PA6NE21 464 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A16PA6NEW6 464 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A20PA6NIJ5 464 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A8PA6NJQ4 464 aa11.28□□□□□ -0.6
CACNA1D-206ENST00000481478 FAM90A7PA6NKC0 464 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms