RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 OR52L2PQ8NGH6 319 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 OR13D1Q8NGV5 346 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 RFESDQ8TAC1 157 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 MRGPRFQ96AM1 343 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 SLC5A7Q9GZV3 580 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 NARFLQ9H6Q4 476 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 HEXA-AS1Q9H8Q6 139 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 FAM212BQ9NTI7 297 aaPredicted RBP8.35□□□□□ -1.07
USP39-215ENST00000481409 OR1A1Q9P1Q5 309 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 KCNIP3Q9Y2W7 256 aa8.35□□□□□ -1.07
USP39-215ENST00000481409 MALRD1Q5VYJ5 2156 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 A0A096LNT2 108 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 RAB29O14966 203 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 ARPC1BO15143 372 aaKnown RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 PHF1O43189 567 aaPredicted RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 RLN1P04808 185 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 ANXA3P12429 323 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 CCL3L1P16619 93 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 IL3RAP26951 378 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 GNRHRP30968 328 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 TAGLNQ01995 201 aaKnown RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 GLDNQ6ZMI3 551 aaPredicted RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 ZNF66Q6ZN08 573 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 SLC25A48Q6ZT89 311 aaKnown RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 SGPP2Q8IWX5 399 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 FGFRL1Q8N441 504 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 C11orf42Q8N5U0 333 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 LINC01356Q8N9X3 169 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 BEND2Q8NDZ0 799 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 OR9G1Q8NH87 305 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 TOMM40LQ969M1 308 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 TMEM186Q96B77 213 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 GALNT14Q96FL9 552 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 AGMATQ9BSE5 352 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 ABHD14AQ9BUJ0 271 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 REG4Q9BYZ8 158 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 FXYD6Q9H0Q3 95 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 MMP28Q9H239 520 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 TMEM133Q9H2Q1 129 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 C5orf66Q9H5L9 145 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 ZNF221Q9UK13 617 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 VSIG4Q9Y279 399 aa8.34□□□□□ -1.07
USP39-215ENST00000481409 AMMECR1Q9Y4X0 333 aaPredicted RBP8.34□□□□□ -1.07
USP39-215ENST00000481409 TRAV6A0A075B6T7 132 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 A0A0B4J2A0 478 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 C7orf66A4D0T2 115 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 J3QLI3 93 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 CREBL2O60519 120 aaPredicted RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 MSMBP08118 114 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 OR4E1P0C645 316 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 SPNP16150 400 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 NFYBP25208 207 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 ZFP36P26651 326 aaKnown RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 PPP1CCP36873 323 aaKnown RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 GZMKP49863 264 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 ZNF137PP52743 207 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 DVL1P1P54792 670 aaPredicted RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 PIGPP57054 158 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 FXYD4P59646 89 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 SRPXP78539 464 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 CATR1Q13166 79 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 TATDN3Q17R31 274 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 PRAMEF5Q5TYX0 476 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 HIST2H2BCQ6DN03 193 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 LDLRAD3Q86YD5 345 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 ZNF439Q8NDP4 499 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 OR11H6Q8NGC7 330 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 SECTM1Q8WVN6 248 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 ADTRPQ96IZ2 230 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 S1PR3Q99500 378 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 HSD17B10Q99714 261 aaKnown RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 RTBDNQ9BSG5 229 aaPredicted RBP8.33□□□□□ -1.08
USP39-215ENST00000481409 SUCNR1Q9BXA5 334 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 CLEC7AQ9BXN2 247 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 TMPRSS13Q9BYE2 586 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 SLC2A9Q9NRM0 540 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 ONECUT1Q9UBC0 465 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 SHPKQ9UHJ6 478 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 INSIG2Q9Y5U4 225 aa8.33□□□□□ -1.08
USP39-215ENST00000481409 AKAP6Q13023 2319 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 IGHV2-26A0A0B4J1V2 119 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 IGKV1D-13A0A0B4J2D9 117 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 CRYM-AS1A6NIL9 109 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 FAM157AC9JC47 383 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 J3QR06 171 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 TOR1AO14656 332 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 TXNL1O43396 289 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 DUS4LO95620 317 aaKnown RBP8.32□□□□□ -1.08
USP39-215ENST00000481409 OR8U9P0C7N5 309 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 TRAPPC2P0DI81 140 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 TRAPPC2BP0DI82 140 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 IGKV1-13P0DP09 117 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 RPA2P15927 270 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 OMGP23515 440 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 GPR12P47775 334 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 LCN2P80188 198 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 PAX8Q06710 450 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 GNMTQ14749 295 aa8.32□□□□□ -1.08
USP39-215ENST00000481409 C4orf46Q504U0 113 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms