RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 PRKACBP22694 351 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 RRM2P31350 389 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 ADMP35318 185 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 SSBP2P81877 361 aaPredicted RBP8.56□□□□□ -1.04
USP11-208ENST00000480104 LIPEQ05469 1076 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 Q6ZSN1 163 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 CENPSQ8N2Z9 138 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 BBS1Q8NFJ9 593 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 GHSRQ92847 366 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 C17orf77Q96MU5 243 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 APOL4Q9BPW4 351 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 ZNF581Q9P0T4 197 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 V9GYQ6 96 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 NACAE9PAV3 2078 aa8.56□□□□□ -1.04
USP11-208ENST00000480104 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 SLC22A1O15245 554 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 ORC5O43913 435 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 OR2C1O95371 312 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 ATF1P18846 271 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 MAGEA2P43356 314 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 LGALS7P47929 136 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 RPS7P62081 194 aaKnown RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 COQ5Q5HYK3 327 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 METTL21CQ5VZV1 264 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 STEAP3Q658P3 488 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 ASB17Q8WXJ9 295 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 PP6455Q8WZ26 134 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 ADAT3Q96EY9 351 aaPredicted RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 OPALINQ96PE5 141 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 SPAG8Q99932 426 aaPredicted RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 DPCDQ9BVM2 203 aaPredicted RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 RPL36Q9Y3U8 105 aaKnown RBP8.55□□□□□ -1.04
USP11-208ENST00000480104 SNX5Q9Y5X3 404 aa8.55□□□□□ -1.04
USP11-208ENST00000480104 PRODHO43272 600 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 GASTP01350 101 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 GSTP1P09211 210 aaKnown RBP8.54□□□□□ -1.04
USP11-208ENST00000480104 RHOGP84095 191 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 GNMTQ14749 295 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 PSG5Q15238 335 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 ZNF124Q15973 351 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 TMEM30BQ3MIR4 351 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 RNF212Q495C1 297 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 ZNF833PQ6ZTB9 187 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 SAXO1Q8IYX7 474 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 PRR18Q8N4B5 295 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 FAM46BQ96A09 425 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 SPSB1Q96BD6 273 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 ABHD14AQ9BUJ0 271 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 C6orf62Q9GZU0 229 aaPredicted RBP8.54□□□□□ -1.04
USP11-208ENST00000480104 AKIP1Q9NQ31 210 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 RCC2Q9P258 522 aaKnown RBP8.54□□□□□ -1.04
USP11-208ENST00000480104 CELA1Q9UNI1 258 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 DMRT1Q9Y5R6 373 aa8.54□□□□□ -1.04
USP11-208ENST00000480104 ELOA3CA0A087WX78 387 aaPredicted RBP8.53□□□□□ -1.04
USP11-208ENST00000480104 SAA2-SAA4A0A096LPE2 208 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 ZNF320A2RRD8 509 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 A8MWP6 167 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 FAM90A23PA8MXZ1 464 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 TUSC2O75896 110 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 FADS2O95864 444 aaKnown RBP8.53□□□□□ -1.04
USP11-208ENST00000480104 CA1P00915 261 aaPredicted RBP8.53□□□□□ -1.04
USP11-208ENST00000480104 SAA2P0DJI9 122 aaPredicted RBP8.53□□□□□ -1.04
USP11-208ENST00000480104 APELAP0DMC3 54 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 TMEM187Q14656 261 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 C12orf74Q32Q52 190 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 PIGYQ3MUY2 71 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 SUMF2Q8NBJ7 301 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 OR1L1Q8NH94 360 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 GID8Q9NWU2 228 aa8.53□□□□□ -1.04
USP11-208ENST00000480104 LOC107986453A0A1B0GWG9 222 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 FAM223BA6NKX1 122 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 BBIP1A8MTZ0 92 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 SPINT2O43291 252 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 GGCTO75223 188 aaKnown RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 PRH1P02810 166 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 SLC2A5P22732 501 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 MAP2K4P45985 399 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 ATP5G2Q06055 141 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 ALKBH1Q13686 389 aaKnown RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 IL13RA2Q14627 380 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 MICAQ29983 383 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 ZNF322Q6U7Q0 402 aaPredicted RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 GLDNQ6ZMI3 551 aaPredicted RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 FAM223AQ8IWN6 122 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 AQP11Q8NBQ7 271 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 ADAD2Q8NCV1 583 aaKnown RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 C10orf35Q96D05 121 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 MRPS24Q96EL2 167 aaKnown RBP8.52□□□□□ -1.05
USP11-208ENST00000480104 NKIRAS1Q9NYS0 192 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 ING4Q9UNL4 249 aa8.52□□□□□ -1.05
USP11-208ENST00000480104 NBDYA0A0U1RRE5 68 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 H3BNX3 289 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 FAM229AH3BQW9 127 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 NME4O00746 187 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 RPP14O95059 124 aaKnown RBP8.51□□□□□ -1.05
USP11-208ENST00000480104 HBZP02008 142 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 SEMG1P04279 462 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 OCM2P0CE71 109 aa8.51□□□□□ -1.05
USP11-208ENST00000480104 OCMP0CE72 109 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms