RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 DRAM1Q8N682 238 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 ZNRF1Q8ND25 227 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 OR52L2PQ8NGH6 319 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 STOML3Q8TAV4 291 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 ST8SIA2Q92186 375 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 YPEL2Q96QA6 119 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 SAP30LQ9HAJ7 183 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 OR2S2Q9NQN1 319 aa8.21□□□□□ -1.1
RAD51B-208ENST00000479335 PPIAL4EA0A075B759 164 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 A0A1B0GU03 582 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 RPS10-NUDT3A0A1W2PQS6 291 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 MED19A0JLT2 244 aaPredicted RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 NKX2-6A6NCS4 301 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 F5H0A9 414 aaPredicted RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 PPIAL4DF5H284 164 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 TMEM178BH3BS89 294 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 K7EPK0 472 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 FSTL3O95633 263 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 TFF1P04155 84 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 PPIAL4FP0DN26 164 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 MMP9P14780 707 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 AGAP20933 346 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 P2RY1P47900 373 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 EDDM3AQ14507 147 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 MST1LQ2TV78 715 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 THOC7Q6I9Y2 204 aaKnown RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF66Q6ZN08 573 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 LINC01560Q8TB33 94 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 RRNAD1Q96FB5 475 aaKnown RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 GAFA1Q96PS6 74 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 TMEM204Q9BSN7 226 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF471Q9BX82 626 aaPredicted RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 KRTAP3-3Q9BYR6 98 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 KRTAP3-2Q9BYR7 98 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 LINC00574Q9H8X3 128 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 CISD1Q9NZ45 108 aaKnown RBP8.2□□□□□ -1.1
RAD51B-208ENST00000479335 GAB2Q9UQC2 676 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 PPIAL4AQ9Y536 164 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 AUP1Q9Y679 476 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 POMT1Q9Y6A1 747 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 CACNA1DQ01668 2161 aa8.2□□□□□ -1.1
RAD51B-208ENST00000479335 ICE1Q9Y2F5 2266 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 TRGV10A0A0A0MS01 117 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 NKX6-3A6NJ46 265 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 NDUFA2O43678 99 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 ATG12O94817 140 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 HKR1P10072 659 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 RPL12P30050 165 aaKnown RBP8.19□□□□□ -1.1
RAD51B-208ENST00000479335 ID3Q02535 119 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 MEF2CQ06413 473 aaPredicted RBP8.19□□□□□ -1.1
RAD51B-208ENST00000479335 CATR1Q13166 79 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
RAD51B-208ENST00000479335 GNMTQ14749 295 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 SWI5Q1ZZU3 235 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 MORN2Q502X0 79 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 FAM201AQ5SY85 155 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 TPRX1Q8N7U7 411 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 OR10A7Q8NGE5 316 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 OR52M1Q8NGK5 317 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 UBALD1Q8TB05 177 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 SLC25A32Q9H2D1 315 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 DYNLRB1Q9NP97 96 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 TMEM106BQ9NUM4 274 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 KCNS2Q9ULS6 477 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 LSM5Q9Y4Y9 91 aaKnown RBP8.19□□□□□ -1.1
RAD51B-208ENST00000479335 NCOR2Q9Y618 2525 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 DSCAMO60469 2012 aa8.19□□□□□ -1.1
RAD51B-208ENST00000479335 KBTBD11-OT1A0A1B0GTJ5 212 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 A0A1B0GW55 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF729A6NN14 1252 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 TNFRSF13BO14836 293 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 TNFSF12O43508 249 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 SPDEFO95238 335 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L2P0CJ85 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L3P0CJ86 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L4P0CJ87 422 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L5P0CJ88 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L6P0CJ89 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 DUX4L7P0CJ90 424 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 TPT1P13693 172 aaKnown RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 PVALBP20472 110 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 SSTR5P35346 364 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 PPP1CCP36873 323 aaKnown RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 NKX2-1P43699 371 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 EDDM3BP56851 147 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 TFF3Q07654 80 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 ZNF672Q499Z4 452 aaPredicted RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 C4orf17Q53FE4 359 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 FAM219AQ8IW50 185 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 OR51H1Q8NH63 302 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 LRRC20Q8TCA0 184 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 CD300LFQ8TDQ1 290 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 CCL13Q99616 98 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 HSD17B10Q99714 261 aaKnown RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 PARP12Q9H0J9 701 aaKnown RBP8.18□□□□□ -1.1
RAD51B-208ENST00000479335 OR2D2Q9H210 308 aa8.18□□□□□ -1.1
RAD51B-208ENST00000479335 CYTL1Q9NRR1 136 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms