RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 PRRT1Q99946 306 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 PIMREGQ9BSJ6 248 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 BPESC1Q9GZL8 116 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 DPAGT1Q9H3H5 408 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 PATZ1Q9HBE1 687 aaKnown RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 TAF9BQ9HBM6 251 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 C19orf12Q9NSK7 152 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 NECAP2Q9NVZ3 263 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 BEX4Q9NWD9 120 aaPredicted RBP5.48□□□□□ -1.53
USP48-208ENST00000479177 CALYQ9NYX4 217 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 OR6C3Q9NZP0 311 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 LPAR3Q9UBY5 353 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 MIOXQ9UGB7 285 aa5.48□□□□□ -1.53
USP48-208ENST00000479177 ARHGAP32A7KAX9 2087 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 TRGV10A0A0A0MS01 117 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 TRBV6-7A0A0A0MS04 114 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 A0A0A6YYJ9 748 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 hADV38S2A0JD32 116 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 MEX3AA1L020 520 aaKnown RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 VWC2LB2RUY7 222 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 NDUFS8O00217 210 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 BET1O15155 118 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 TUSC2O75896 110 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 IGHV2-5P01817 119 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 HBZP02008 142 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 TCRBP04435 133 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 IFNA6P05013 189 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 WNT2P09544 360 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CTXN2P0C2S0 81 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CGB3P0DN86 165 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CGB7P0DN87 165 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 SEC61A1P61619 476 aaKnown RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 RPL31P62899 125 aaKnown RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 ZNF273Q14593 569 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 RBMS2Q15434 407 aaKnown RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 C17orf58Q2M2W7 97 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 IGSF11Q5DX21 431 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 WDR25Q64LD2 544 aaPredicted RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 PLET1Q6UQ28 207 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 Q6ZNX1 250 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 IDO2Q6ZQW0 420 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 BTN2A1Q7KYR7 527 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 H1FOOQ8IZA3 346 aaPredicted RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 CLDND2Q8NHS1 167 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 H1FXQ92522 213 aaKnown RBP5.47□□□□□ -1.53
USP48-208ENST00000479177 CORO2AQ92828 525 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CREB3L1Q96BA8 519 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 FXYD6Q9H0Q3 95 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 C20orf85Q9H1P6 137 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 MMP28Q9H239 520 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 NARFLQ9H6Q4 476 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 LINC00574Q9H8X3 128 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 NUDT15Q9NV35 164 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 KCNIP1Q9NZI2 227 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 OR1A1Q9P1Q5 309 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 COPZ2Q9P299 210 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 CLN8Q9UBY8 286 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 OPN4Q9UHM6 478 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 SCP2D1Q9UJQ7 156 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 NUBP2Q9Y5Y2 271 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 LINC00312Q9Y6C7 94 aa5.47□□□□□ -1.53
USP48-208ENST00000479177 ACANP16112 2415 aa5.46□□□□□ -1.53
USP48-208ENST00000479177 CSPG4Q6UVK1 2322 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 YLPM1P49750 1951 aaKnown RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 IGHV4-30-2A0A087WSY4 118 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 KBTBD11-OT1A0A1B0GTJ5 212 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 OR5H14A6NHG9 310 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ZNF729A6NN14 1252 aaPredicted RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 VGLL3A8MV65 326 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 A8MXK9 166 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 F2RL2O00254 374 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ARPC1BO15143 372 aaKnown RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 SPINT2O43291 252 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 GZMHP20718 246 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 AADACP22760 399 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 NFYAP23511 347 aaPredicted RBP5.46□□□□□ -1.54
USP48-208ENST00000479177 DNASE1P24855 282 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 IL2RGP31785 369 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 FCGR2CP31995 323 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 NPY4RP50391 375 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 DLX6P56179 175 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 DSCR9P59020 149 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 LMO4P61968 165 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TSPAN5P62079 268 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 HTD2P86397 168 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 GNMTQ14749 295 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 DEFB113Q30KQ7 82 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TMEM30BQ3MIR4 351 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 SCGB2B2Q4G0G5 96 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 AADACL3Q5VUY0 350 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 DHRS11Q6UWP2 260 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 Q6ZSN1 163 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TMEM17Q86X19 198 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 FAM185AQ8N0U4 392 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 LRRC75A-AS1Q8N1F1 130 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 PRR18Q8N4B5 295 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 ZDHHC22Q8N966 263 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 TERB2Q8NHR7 220 aa5.46□□□□□ -1.54
USP48-208ENST00000479177 C8orf46Q8TAG6 207 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms