RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 C12orf54Q6X4T0 127 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF554Q86TJ5 538 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 LYG1Q8N1E2 194 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 DTX3Q8N9I9 347 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 OR2AK2Q8NG84 335 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 OR56B4Q8NH76 319 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 PIFOQ8TCI5 191 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 DCSTAMPQ9H295 470 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 Q9N2K0 584 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 C1RLQ9NZP8 487 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 OR1A1Q9P1Q5 309 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 COMMD3Q9UBI1 195 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 MGAT4AQ9UM21 535 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 SPATA2Q9UM82 520 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 TCF19Q9Y242 345 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 CMYA5Q8N3K9 4069 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 TRAV18A0A075B6X5 111 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 TRDCB7Z8K6 153 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 LY6LH3BQJ8 138 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 TIMM23O14925 209 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 BET1O15155 118 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ST8SIA5O15466 376 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 RGS11O94810 467 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 SCTP09683 121 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 MDKP21741 143 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 BRS3P32247 399 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 RPL5P46777 297 aaKnown RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 GNG2P59768 71 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 HTD2P86397 168 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 HES1Q14469 280 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ARL6IP1Q15041 203 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 FBLN7Q53RD9 439 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 AWAT1Q58HT5 328 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 CT45A1Q5HYN5 189 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 HACD4Q5VWC8 232 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 STEAP3Q658P3 488 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 SLC25A48Q6ZT89 311 aaKnown RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 MOB3BQ86TA1 216 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 DRAM1Q8N682 238 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF439Q8NDP4 499 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 CT45A3Q8NHU0 189 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 OCSTAMPQ9BR26 566 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 PARP12Q9H0J9 701 aaKnown RBP5.55□□□□□ -1.52
BRCA1-215ENST00000478531 RAB18Q9NP72 206 aa5.55□□□□□ -1.52
BRCA1-215ENST00000478531 IGHV3-72A0A0B4J1Y9 119 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 A0A1W2PPI3 338 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM89A2RUT3 159 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 CCDC160A6NGH7 325 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 FABP7O15540 132 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 GSTP1P09211 210 aaKnown RBP5.54□□□□□ -1.52
BRCA1-215ENST00000478531 PTHLHP12272 177 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 ZBTB25P24278 435 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 CEACAM6P40199 344 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 OR3A3P47888 321 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 RAB7AP51149 207 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 RORCP51449 518 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 RPL15P61313 204 aaKnown RBP5.54□□□□□ -1.52
BRCA1-215ENST00000478531 FOXL1Q12952 345 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 SPCS2Q15005 226 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 HERPUD1Q15011 391 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF260Q3ZCT1 412 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 Q3ZCU0 254 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM69Q5SWH9 247 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 LINC00311Q8N616 119 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 C3orf56Q8N813 242 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 C8orf31Q8N9H6 132 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 OR8H1Q8NGG4 311 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 OR4F5Q8NH21 305 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 RAB2BQ8WUD1 216 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 CAPSLQ8WWF8 208 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 ST6GALNAC5Q9BVH7 336 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 DIABLOQ9NR28 239 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 PITPNC1Q9UKF7 332 aa5.54□□□□□ -1.52
BRCA1-215ENST00000478531 SAA2-SAA4A0A096LPE2 208 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGHV1-3A0A0C4DH29 117 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGKV1-6A0A0C4DH72 117 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 MEIS3P1A6NDR6 274 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 A6NDX4 124 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 OOSP1A8MZH6 123 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 YPEL1O60688 119 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM127O75204 238 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGKV1D-33P01593 117 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGKV1-33P01594 117 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 GAPDHP04406 335 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 EIF4EP06730 217 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 FCER2P06734 321 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 LPLP06858 475 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SNRNP70P08621 437 aaKnown RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 GSTT2P0CG29 244 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 GSTT2BP0CG30 244 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 SAA2P0DJI9 122 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 KIR2DS4P43632 304 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 DYNLT3P51808 116 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 HNF4GQ14541 408 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 KIR2DS1Q14954 304 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 IGSF11Q5DX21 431 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 ARSJQ5FYB0 599 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-215ENST00000478531 LIAT1Q6ZQX7 453 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 Q6ZSV7 163 aa5.53□□□□□ -1.52
BRCA1-215ENST00000478531 TGIF2LXQ8IUE1 241 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms