RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 DAPK2Q9UIK4 370 aa12.44□□□□□ -0.42
HMGA1-206ENST00000478214 KCNK7Q9Y2U2 307 aa12.44□□□□□ -0.42
HMGA1-206ENST00000478214 IGKV1D-33P01593 117 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 IGKV1-33P01594 117 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 AMY1AP04745 511 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 AMY2AP04746 511 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 SNRPBP14678 240 aaKnown RBP12.43□□□□□ -0.42
HMGA1-206ENST00000478214 HLA-DRB3P79483 266 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 ABCA11PQ4W5N1 156 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 ARSJQ5FYB0 599 aaPredicted RBP12.43□□□□□ -0.42
HMGA1-206ENST00000478214 SFXN4Q6P4A7 337 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 LYG1Q8N1E2 194 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 C11orf44Q8N8P7 122 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 PTX4Q96A99 478 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 VCX3AQ9NNX9 186 aa12.43□□□□□ -0.42
HMGA1-206ENST00000478214 A0A075B6Q4 140 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 METTL21EPA6NDL7 271 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 TRIM64CA6NLI5 447 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 MFNGO00587 321 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 RGS11O94810 467 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 SCTP09683 121 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 CD3GP09693 182 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 HIST1H1DP16402 221 aaKnown RBP12.42□□□□□ -0.42
HMGA1-206ENST00000478214 GNB3P16520 340 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 TMEM11P17152 192 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
HMGA1-206ENST00000478214 HERPUD1Q15011 391 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 LY6G6FQ5SQ64 297 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 TGIF2LXQ8IUE1 241 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 RBMXL1Q96E39 390 aaKnown RBP12.42□□□□□ -0.42
HMGA1-206ENST00000478214 YIPF6Q96EC8 236 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 PARP12Q9H0J9 701 aaKnown RBP12.42□□□□□ -0.42
HMGA1-206ENST00000478214 ATG5Q9H1Y0 275 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 MGAT4AQ9UM21 535 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 MOB4Q9Y3A3 225 aa12.42□□□□□ -0.42
HMGA1-206ENST00000478214 ZNF736B4DX44 427 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-206ENST00000478214 LANCL1O43813 399 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 LPLP06858 475 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 TGFBR1P36897 503 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 EBI3Q14213 229 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 TIMM50Q3ZCQ8 353 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 ODF3L1Q8IXM7 274 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 OR2AK2Q8NG84 335 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 LGALS14Q8TCE9 139 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 EAF1Q96JC9 268 aaPredicted RBP12.41□□□□□ -0.42
HMGA1-206ENST00000478214 WNT10AQ9GZT5 417 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 SLC23A1Q9UHI7 598 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 VWFP04275 2813 aa12.41□□□□□ -0.42
HMGA1-206ENST00000478214 WNK1Q9H4A3 2382 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 TRDCB7Z8K6 153 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 M0QZ24 198 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 M0QZK8 103 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 ST8SIA5O15466 376 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 TXNL1O43396 289 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 AIREO43918 545 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 PEX14O75381 377 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 CD1BP29016 333 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 OR3A3P47888 321 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 MRPS15P82914 257 aaKnown RBP12.4□□□□□ -0.42
HMGA1-206ENST00000478214 C9orf152Q5JTZ5 239 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 IZUMO1Q8IYV9 350 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 IFI27L2Q9H2X8 130 aa12.4□□□□□ -0.42
HMGA1-206ENST00000478214 ELF5Q9UKW6 265 aaPredicted RBP12.4□□□□□ -0.42
HMGA1-206ENST00000478214 IGKV1-6A0A0C4DH72 117 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 SERPINE3A8MV23 424 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 HSPA12AO43301 675 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 FCGR3AP08637 254 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 CEACAM6P40199 344 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 LSM3P62310 102 aaKnown RBP12.39□□□□□ -0.43
HMGA1-206ENST00000478214 CDNFQ49AH0 187 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 IDNKQ5T6J7 187 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 TREML4Q6UXN2 200 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 Q8N6K4 173 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 OR5H6Q8NGV6 325 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 OR2T10Q8NGZ9 312 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 WIPF2Q8TF74 440 aaPredicted RBP12.39□□□□□ -0.43
HMGA1-206ENST00000478214 MAFIPQ8WZ33 124 aa12.39□□□□□ -0.43
HMGA1-206ENST00000478214 MRPL20Q9BYC9 149 aaKnown RBP12.39□□□□□ -0.43
HMGA1-206ENST00000478214 ZNF230Q9UIE0 474 aaPredicted RBP12.39□□□□□ -0.43
HMGA1-206ENST00000478214 SAA2-SAA4A0A096LPE2 208 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 FABP7O15540 132 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 FGF16O43320 207 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 MOSP00540 346 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 SAA2P0DJI9 122 aaPredicted RBP12.38□□□□□ -0.43
HMGA1-206ENST00000478214 CD28P10747 220 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 ZBTB25P24278 435 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 LSAMPQ13449 338 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 ARFRP1Q13795 201 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 ZNF833PQ6ZTB9 187 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 C11orf54Q9H0W9 315 aaPredicted RBP12.38□□□□□ -0.43
HMGA1-206ENST00000478214 RHBDL2Q9NX52 303 aa12.38□□□□□ -0.43
HMGA1-206ENST00000478214 NCBP2LA6PVI3 153 aaKnown RBP12.37□□□□□ -0.43
HMGA1-206ENST00000478214 FBXO24O75426 580 aa12.37□□□□□ -0.43
HMGA1-206ENST00000478214 TSPAN15O95858 294 aa12.37□□□□□ -0.43
HMGA1-206ENST00000478214 GSTT2P0CG29 244 aa12.37□□□□□ -0.43
HMGA1-206ENST00000478214 GSTT2BP0CG30 244 aa12.37□□□□□ -0.43
HMGA1-206ENST00000478214 SMIM18P0DKX4 95 aa12.37□□□□□ -0.43
HMGA1-206ENST00000478214 TALDO1P37837 337 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms