RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SLC22A20A6NK97 555 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 H0Y980 276 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 DEGS1O15121 323 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 PITX3O75364 302 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MT-CO3P00414 261 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SP1P08047 785 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SFTA3P0C7M3 94 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 DANCRP0C864 163 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SPP1P10451 314 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CD59P13987 128 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 PRKACAP17612 351 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 UCP1P25874 307 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 PAX6P26367 422 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 GNRHRP30968 328 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CD80P33681 288 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SNCAP37840 140 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MDH2P40926 338 aaKnown RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 RFC3P40938 356 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MAGEA5P43359 124 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 NKX2-1P43699 371 aaPredicted RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 NPBWR1P48145 328 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CAMLGP49069 296 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 GPM6AP51674 278 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ARHGDIBP52566 201 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 VAMP2P63027 116 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 HLA-DRB3P79483 266 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 EWSR1Q01844 656 aaKnown RBP eCLIP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 TLE1Q04724 770 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 IL24Q13007 206 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF266Q14584 549 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SLC10A1Q14973 349 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 DAZAP2Q15038 168 aaPredicted RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 HFEQ30201 348 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MIDNQ504T8 468 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 IGSF11Q5DX21 431 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SPIN3Q5JUX0 258 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 C9orf135Q5VTT2 229 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SHEQ5VZ18 495 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF880Q6PDB4 577 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MEX3BQ6ZN04 569 aaKnown RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 Q6ZPA2 131 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MOB1BQ7L9L4 216 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 NUFIP2Q7Z417 695 aaKnown RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 TBC1D26Q86UD7 250 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CMTM1Q8IZ96 169 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SELENOHQ8IZQ5 122 aaKnown RBP4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CLEC18CQ8NCF0 446 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MDS2Q8NDY4 140 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 OR8G5Q8NG78 346 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 OR52M1Q8NGK5 317 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 OR5D13Q8NGL4 314 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 OR1K1Q8NGR3 316 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 NEK7Q8TDX7 302 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SECTM1Q8WVN6 248 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 OR5P3Q8WZ94 311 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 BOD1Q96IK1 185 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 TP53RKQ96S44 253 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CABLES2Q9BTV7 478 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 HES7Q9BYE0 225 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 SMDT1Q9H4I9 107 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 PLEKHF2Q9H8W4 249 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 WFDC1Q9HC57 220 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 C19orf12Q9NSK7 152 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 MTCH1Q9NZJ7 389 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CACFD1Q9UGQ2 172 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 CDC42EP3Q9UKI2 254 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ZDHHC8Q9ULC8 765 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 FAM96BQ9Y3D0 163 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF175Q9Y473 711 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 DOCK7Q96N67 2140 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 ARID1AO14497 2285 aa4.19□□□□□ -1.74
SF3B6-202ENST00000478050 BTBD17A6NE02 478 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 UMAD1C9J7I0 102 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 FAM157AC9JC47 383 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 NPIPB11E5RHQ5 1161 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 J3QT63 122 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 K7N7A8 449 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 WRBO00258 174 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 HSD17B6O14756 317 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 HSPA12AO43301 675 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 NDUFA2O43678 99 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 SYNGR1O43759 233 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 NGFP01138 241 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 PRH1P02810 166 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 SCTP09683 121 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 OR8U9P0C7N5 309 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 SLC25A6P12236 298 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 CCL2P13500 99 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 MALP21145 153 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 VDAC1P21796 283 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 FOXG1P55316 489 aaPredicted RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 BAXQ07812 192 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 ZNF616Q08AN1 781 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 MRPL49Q13405 166 aaKnown RBP4.18□□□□□ -1.74
SF3B6-202ENST00000478050 OR8G1Q15617 311 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TSC22D1Q15714 1073 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 GUK1Q16774 197 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 TBC1D28Q2M2D7 210 aa4.18□□□□□ -1.74
SF3B6-202ENST00000478050 NMSQ5H8A3 153 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms