RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 A0A0U1RQV1 116 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 LOC100130705A0A1B0GUX0 176 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 A0A1B0GV50 99 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 TCRBV9S1A1TA0A576 114 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 A6NDN8 102 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 OR5B21A6NL26 309 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 LYRM9A8MSI8 78 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 BTNL10A8MVZ5 291 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 H3BMQ9 156 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 NTN1O95631 604 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 LGALS1P09382 135 aaKnown RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 CD99P14209 185 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF19P17023 458 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 CHRNB2P17787 502 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 RPL7P18124 248 aaKnown RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 COX5AP20674 150 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 PRTN3P24158 256 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SFTPDP35247 375 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 LHX2P50458 406 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 POLR2HP52434 150 aaKnown RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 NDUFA6P56556 154 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 LINC00205P59089 165 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ISL1P61371 349 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SP4Q02446 784 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 HSD52Q0P140 79 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 TAF10Q12962 218 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SIX1Q15475 284 aaPredicted RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ODF3L2Q3SX64 289 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 FHL5Q5TD97 284 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 IZUMO2Q6UXV1 221 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 C12orf54Q6X4T0 127 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 C9orf47Q6ZRZ4 202 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 GOLT1AQ6ZVE7 132 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 FAM183BPQ6ZVS7 135 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 TMUB2Q71RG4 321 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 Q75L30 129 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 CHMP1BQ7LBR1 199 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SERPINA11Q86U17 422 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SVBPQ8N300 66 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 TEX45Q8NA69 505 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 FER1L6-AS1Q8NA97 138 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 TMEM178AQ8NBL3 297 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 GPR26Q8NDV2 337 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ACVR1CQ8NER5 493 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 OR51Q1Q8NH59 317 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 OR1L1Q8NH94 360 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 RHOXF1Q8NHV9 184 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 PP6455Q8WZ26 134 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ZMYND19Q96E35 227 aaPredicted RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 PHYHIPLQ96FC7 376 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 PLEKHF1Q96S99 279 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 FAM173AQ9BQD7 235 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF471Q9BX82 626 aaPredicted RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 REEP1Q9H902 201 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SLC25A19Q9HC21 320 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 PLEKHB1Q9UF11 243 aaPredicted RBP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 NTNG1Q9Y2I2 539 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 HDGFL3Q9Y3E1 203 aa2.87□□□□□ -1.95
FNDC3B-209ENST00000478016 FOCADQ5VW36 1801 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 FNDC1Q4ZHG4 1894 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 TRPM7Q96QT4 1865 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MYH3P11055 1940 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MTCL1Q9Y4B5 1905 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PLXND1Q9Y4D7 1925 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 MYBPHLA2RUH7 354 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 DDTLA6NHG4 134 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF724A8MTY0 619 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 C9JAW5 83 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 TMEM178BH3BS89 294 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CCL24O00175 119 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CCL21O00585 134 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 CDC42EP2O14613 210 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PDCD5O14737 125 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 WNT9BO14905 357 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SPINT2O43291 252 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 GPR137BO60478 399 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 EDF1O60869 148 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 RAMP1O60894 148 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF682O95780 498 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 APOHP02749 345 aaPredicted RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZSCAN5DPP0CG00 497 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 FAM106CPP0CH98 169 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 HIST1H1DP16402 221 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ZNF708P17019 499 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 RAB5AP20339 215 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 IMPA1P29218 277 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 IL2RGP31785 369 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 RPL3P39023 403 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 KIR2DS2P43631 304 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 REG1BP48304 166 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 LCN6P62502 163 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 EIF5AP63241 154 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 FAM27E3Q08E93 113 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 SMAGPQ0VAQ4 97 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 ENDOGQ14249 297 aaKnown RBP2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 LAGE3Q14657 143 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 PDGFRLQ15198 375 aa2.86□□□□□ -1.95
FNDC3B-209ENST00000478016 FAM106AQ4KMX7 169 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms