RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 PRSS8Q16651 343 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 RTL6Q6ICC9 239 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 PPP1R32Q7Z5V6 425 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 SELENOHQ8IZQ5 122 aaKnown RBP8.34□□□□□ -1.07
CMC1-209ENST00000477739 OR52L2PQ8NGH6 319 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 OR5D13Q8NGL4 314 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 SIGLEC12Q96PQ1 595 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 PCGF1Q9BSM1 259 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 OR2J1Q9GZK6 312 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 TMEM222Q9H0R3 208 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 GNG12Q9UBI6 72 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 RPH3ALQ9UNE2 315 aa8.34□□□□□ -1.07
CMC1-209ENST00000477739 A0A087X0M5 115 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 TRAV38-1A0A0B4J264 116 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 A0A1B0GX30 115 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 OR6C6A6NF89 314 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 APELAP0DMC3 54 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 UBE2NP61088 152 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 NCR3LG1Q68D85 454 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 DHRS13Q6UX07 377 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 PROK2Q9HC23 129 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 CEP192Q8TEP8 1941 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 TRBV6-7A0A0A0MS04 114 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 GRIFINA4D1Z8 144 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ZNF503-AS2A6NEH8 195 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 PAGE4O60829 102 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ZNF737O75373 536 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 RAC2P15153 192 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 FGF7P21781 194 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 CCL1P22362 96 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 TCL1AP56279 114 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ZFP36L1Q07352 338 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 PRAMEF6Q5VXH4 476 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ZNF705AQ6ZN79 300 aaPredicted RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 TIPARPQ7Z3E1 657 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 RNF138Q8WVD3 245 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 SF3B5Q9BWJ5 86 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 TUBG2Q9NRH3 451 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 SERTAD4Q9NUC0 356 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 FBLN5Q9UBX5 448 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 TLN1Q9Y490 2541 aaKnown RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 TRAV34A0A0B4J273 112 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 OR5H1A6NKK0 313 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 PPP5D1E7EU14 171 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 ST8SIA5O15466 376 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 SYNGR3O43761 229 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BKO60814 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BJP06899 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BOP23527 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BBP33778 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BDP58876 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BCP62807 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 IL13RA2Q14627 380 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST2H2BEQ16778 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 Q3ZCU0 254 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.33□□□□□ -1.08
CMC1-209ENST00000477739 FAM58AQ8N1B3 248 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 FAM89BQ8N5H3 189 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 OR13D1Q8NGV5 346 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BHQ93079 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 MOB3AQ96BX8 217 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 OR4C12Q96R67 309 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BNQ99877 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 HIST1H2BMQ99879 126 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 CDH20Q9HBT6 801 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 PSG11Q9UQ72 335 aa8.33□□□□□ -1.08
CMC1-209ENST00000477739 NTN3O00634 580 aaPredicted RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 RAMP3O60896 148 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 PGLYRP1O75594 196 aaPredicted RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 DKK1O94907 266 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 CYC1P08574 325 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 VDAC1P21796 283 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 PRB3Q04118 309 aaPredicted RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 SSPNQ14714 243 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 NUFIP2Q7Z417 695 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 OR1L1Q8NH94 360 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 PINX1Q96BK5 328 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 NUDT16L1Q9BRJ7 211 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 Q9N2K0 584 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 STRAPQ9Y3F4 350 aaKnown RBP8.32□□□□□ -1.08
CMC1-209ENST00000477739 TSTD3H0UI37 97 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 SYNGR2O43760 224 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 TOX4O94842 621 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 MPLP40238 635 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 SLC38A11Q08AI6 406 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 ARL16Q0P5N6 197 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 HERPUD1Q15011 391 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 HMGN3Q15651 99 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 FFAR4Q5NUL3 377 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 FAM78BQ5VT40 261 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 Q6ZPA2 131 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 FAM185AQ8N0U4 392 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 EDARADDQ8WWZ3 215 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 V9GYS6 101 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 IGHV3OR15-7A0A075B7D8 119 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 A0A1W2PPV4 95 aa8.32□□□□□ -1.08
CMC1-209ENST00000477739 ZNF320A2RRD8 509 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms