RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 ZNF787Q6DD87 383 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 Q8WTZ3 238 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 TMEM9BQ9NQ34 198 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 GNG13Q9P2W3 67 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 TRAPPC2LQ9UL33 140 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 COL27A1Q8IZC6 1860 aaPredicted RBP15.31■□□□□ 0.04
CCM2-209ENST00000477605 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
CCM2-209ENST00000477605 IFNA1P01562 189 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 SP1P08047 785 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 ZNF146Q15072 292 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 TOLLIPQ9H0E2 274 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 PRSS50Q9UI38 385 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 TIMM9Q9Y5J7 89 aa15.31■□□□□ 0.04
CCM2-209ENST00000477605 H3BP45 60 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 SH2D1BO14796 132 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 OR2H2O95918 312 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 FBP1P09467 338 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 SLC10A1Q14973 349 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 TMEM41BQ5BJD5 291 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 FAM90A2PQ658T7 463 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 MRGPRGQ86SM5 289 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 MDP1Q86V88 176 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 PPP1R3CQ9UQK1 317 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 RBM7Q9Y580 266 aaKnown RBP15.3■□□□□ 0.04
CCM2-209ENST00000477605 CACNA1AO00555 2505 aa15.3■□□□□ 0.04
CCM2-209ENST00000477605 NDUFS6O75380 124 aaKnown RBP15.29■□□□□ 0.04
CCM2-209ENST00000477605 MT-CO3P00414 261 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 MEOX1P50221 254 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 RND2P52198 227 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 ZNF674Q2M3X9 581 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 WDR61Q9GZS3 305 aaKnown RBP15.29■□□□□ 0.04
CCM2-209ENST00000477605 PLA2G3Q9NZ20 509 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 VAX2Q9UIW0 290 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 PGA5P0DJD9 388 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 MSMO1Q15800 293 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 GABRA6Q16445 453 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 LILRB2Q8N423 598 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 SCCPDHQ8NBX0 429 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 MDS2Q8NDY4 140 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 RSG1Q9BU20 258 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 FOXJ2Q9P0K8 574 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 MIOXQ9UGB7 285 aa15.29■□□□□ 0.04
CCM2-209ENST00000477605 ARGFXA6NJG6 315 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 LINC00587B1AMM8 73 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 CXCL1P09341 107 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 METTL15P1P0C7V9 234 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 IAPPP10997 89 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 ERVFRD-1P60508 538 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 RAB11AP62491 216 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 ARL16Q0P5N6 197 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 ATP6V1FQ16864 119 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 LINC00696Q6ZRV3 163 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 P4HA3Q7Z4N8 544 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 CENPVQ7Z7K6 275 aaPredicted RBP15.28■□□□□ 0.04
CCM2-209ENST00000477605 CTDSP1Q9GZU7 261 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 KCNS2Q9ULS6 477 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 A0A1W2PR80 420 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 LNP1A1A4G5 178 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 TMEM210A6NLX4 147 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 CLDN34H7C241 214 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 SIRPB1O00241 398 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 CYB5R3P00387 301 aaPredicted RBP15.28■□□□□ 0.04
CCM2-209ENST00000477605 SELEP16581 610 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 FIP1L1Q6UN15 594 aaKnown RBP15.28■□□□□ 0.04
CCM2-209ENST00000477605 HAPLN4Q86UW8 402 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 DRAM1Q8N682 238 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 CA5BP1Q8WTZ4 195 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 RCC1LQ96I51 464 aaKnown RBP15.28■□□□□ 0.04
CCM2-209ENST00000477605 DOK5Q9P104 306 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 OR14J1Q9UGF5 321 aa15.28■□□□□ 0.04
CCM2-209ENST00000477605 ELOA3CA0A087WX78 387 aaPredicted RBP15.27■□□□□ 0.03
CCM2-209ENST00000477605 SEC14L6B5MCN3 397 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 RAC2P15153 192 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 CEACAM6P40199 344 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 ZNF726P1Q15940 193 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 IZUMO4Q1ZYL8 232 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 NCMAPQ5T1S8 102 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 TMEM14EPQ6UXP3 125 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 WDR86Q86TI4 376 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 LURAP1LQ8IV03 231 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 FGFRL1Q8N441 504 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 FER1L6-AS2Q96M78 137 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 SDF2L1Q9HCN8 221 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 KCNIP1Q9NZI2 227 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 SPTBN2O15020 2390 aa15.27■□□□□ 0.03
CCM2-209ENST00000477605 S100A2P29034 98 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 ZNF343Q6P1L6 599 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 C1orf87Q8N0U7 546 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 TCTEX1D1Q8N7M0 179 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 TAF15Q92804 592 aaKnown RBP eCLIP15.26■□□□□ 0.03
CCM2-209ENST00000477605 WDYHV1Q96HA8 205 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 OR4C12Q96R67 309 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 ZFP92A6NM28 416 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 NXPH2O95156 264 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 CD46P15529 392 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 NDUFA6P56556 154 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 PPP1CBP62140 327 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 LCN15Q6UWW0 184 aa15.26■□□□□ 0.03
CCM2-209ENST00000477605 ZNF645Q8N7E2 425 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms