RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 FUOMA2VDF0 154 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 VGLL3A8MV65 326 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 GABARAPH6UMI1 98 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 PPP5CP53041 499 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 PAX5Q02548 391 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 SHISA2Q6UWI4 295 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 MALSU1Q96EH3 234 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 SRRQ9GZT4 340 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 GAL3ST2Q9H3Q3 398 aa14.19□□□□□ -0.14
PTPN7-209ENST00000477554 A6NDX4 124 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 ZNF729A6NN14 1252 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-209ENST00000477554 POM121CA8CG34 1229 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 GSTZ1O43708 216 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-209ENST00000477554 TSPAN9O75954 239 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 LPLP06858 475 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 CBX5P45973 191 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 Q8N402 240 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 SMIM4Q8WVI0 70 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 C16orf95Q9H693 158 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 C12orf4Q9NQ89 552 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 ELF5Q9UKW6 265 aaPredicted RBP14.18□□□□□ -0.14
PTPN7-209ENST00000477554 TCF19Q9Y242 345 aa14.18□□□□□ -0.14
PTPN7-209ENST00000477554 NPIPB11E5RHQ5 1161 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 PTHLHP12272 177 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 DTYMKP23919 212 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 CD34P28906 385 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 RPL15P61313 204 aaKnown RBP14.17□□□□□ -0.14
PTPN7-209ENST00000477554 ZNF497Q6ZNH5 498 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 GPX8Q8TED1 209 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 NUDCD2Q8WVJ2 157 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 CITED1Q99966 193 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 CCDC32Q9BV29 185 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 CHMP1AQ9HD42 196 aaPredicted RBP14.17□□□□□ -0.14
PTPN7-209ENST00000477554 IDI2-AS1Q9NZ38 188 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 OR6C3Q9NZP0 311 aa14.17□□□□□ -0.14
PTPN7-209ENST00000477554 A0A087X0M5 115 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 IGHV3-43A0A0B4J1X8 118 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 A0A1B0GX30 115 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 TMEM30CPA0ZSE6 113 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 LY6LH3BQJ8 138 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 C15orf65H3BRN8 121 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 RBBP9O75884 186 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 IGHV3-43DP0DP04 118 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 HTR1DP28221 377 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 GNG10P50151 68 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 SSBP1Q04837 148 aaKnown RBP14.16□□□□□ -0.14
PTPN7-209ENST00000477554 AANATQ16613 207 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 HLA-DRB5Q30154 266 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 Q6ZPA2 131 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 GAPTQ8N292 157 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 OCSTAMPQ9BR26 566 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 NCOR1P1Q9H4R4 102 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 LINC00574Q9H8X3 128 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 ZNF702PQ9H963 129 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 PSG11Q9UQ72 335 aa14.16□□□□□ -0.14
PTPN7-209ENST00000477554 MGAM2Q2M2H8 2515 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 TRBV6-6A0A0A6YYG2 114 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 SH2D7A6NKC9 451 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 BUB1B-PAK6H3BSN5 160 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 NAPSAO96009 420 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MT-ND4P03905 459 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 ACTBP60709 375 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 BLCAPP62952 87 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 DGCR2P98153 550 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 TMEM95Q3KNT9 176 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MINOS1Q5TGZ0 78 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 OR4K15Q8NH41 348 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 OR52I2Q8NH67 350 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 THAP7Q9BT49 309 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 IFT46Q9NQC8 304 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MTFP1Q9UDX5 166 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MGAT4AQ9UM21 535 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MINOS1-NBL1R4GNA1 71 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 SSX5O60225 188 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 SRSF7Q16629 238 aaKnown RBP eCLIP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 RNASE12Q5GAN4 147 aaKnown RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MOB1BQ7L9L4 216 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 C11orf44Q8N8P7 122 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 MRPL30Q8TCC3 161 aaKnown RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 SDHCQ99643 169 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 HDHD3Q9BSH5 251 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-209ENST00000477554 DPM3Q9P2X0 92 aa14.15□□□□□ -0.14
PTPN7-209ENST00000477554 SLC31A2O15432 143 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 FCGR3AP08637 254 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 RCC1P18754 421 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-209ENST00000477554 RCVRNP35243 200 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 TPTE2P1Q5T6R2 138 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 OR52W1Q6IF63 320 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 ZNF565Q8N9K5 539 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 TAS2R8Q9NYW2 309 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 KLK11Q9UBX7 282 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 TRAPPC2LQ9UL33 140 aa14.14□□□□□ -0.15
PTPN7-209ENST00000477554 A0A1B0GUS0 222 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 MEIS3P1A6NDR6 274 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 C12orf77C9JDV5 145 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 J3QR06 171 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 J3QRK9 145 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 F2RL2O00254 374 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 ORC5O43913 435 aa14.13□□□□□ -0.15
PTPN7-209ENST00000477554 GSTT2BP0CG30 244 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms