RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 YPEL1O60688 119 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 IFNA2P01563 188 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 NAT1P18440 290 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 LGALS4P56470 323 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 Q3ZCU0 254 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 MORN2Q502X0 79 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 MIDNQ504T8 468 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 LINC00299Q6ZSB3 139 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 PIP4P2Q8N4L2 257 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 BEND2Q8NDZ0 799 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 OR2AK2Q8NG84 335 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 OR4P4Q8NGL7 312 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 OR5H2Q8NGV7 314 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 C22orf15Q8WYQ4 148 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 ABHD14AQ9BUJ0 271 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 SRRQ9GZT4 340 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 PARP12Q9H0J9 701 aaKnown RBP12.45□□□□□ -0.42
SEC13-215ENST00000477547 MMP28Q9H239 520 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 AKIP1Q9NQ31 210 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 NECAP2Q9NVZ3 263 aa12.45□□□□□ -0.42
SEC13-215ENST00000477547 TBL2Q9Y4P3 447 aaKnown RBP12.45□□□□□ -0.42
SEC13-215ENST00000477547 AMMECR1Q9Y4X0 333 aaPredicted RBP12.45□□□□□ -0.42
SEC13-215ENST00000477547 RBBP9O75884 186 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 IGLV1-47P01700 117 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 HLA-DMAP28067 261 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 PRRX1P54821 245 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 BPIFB3P59826 476 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 SSBP1Q04837 148 aaKnown RBP12.44□□□□□ -0.42
SEC13-215ENST00000477547 SCGB2A2Q13296 93 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 CDK10Q15131 360 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 MFSD4AQ8N468 514 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 C8orf31Q8N9H6 132 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 OR5AP2Q8NGF4 316 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 OR10X1Q8NGY0 326 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 EDARADDQ8WWZ3 215 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 RDH8Q9NYR8 311 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 EHFQ9NZC4 300 aa12.44□□□□□ -0.42
SEC13-215ENST00000477547 A0A0U1RQK1 487 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 ST8SIA5O15466 376 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 WIPF1O43516 503 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 HTR1DP28221 377 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 HRH1P35367 487 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 CEACAM6P40199 344 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 OR3A3P47888 321 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 ACTBL2Q562R1 376 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 SLC25A48Q6ZT89 311 aaKnown RBP12.43□□□□□ -0.42
SEC13-215ENST00000477547 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 LHFPL4Q7Z7J7 247 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 H1FOOQ8IZA3 346 aaPredicted RBP12.43□□□□□ -0.42
SEC13-215ENST00000477547 BCL6BQ8N143 479 aaPredicted RBP12.43□□□□□ -0.42
SEC13-215ENST00000477547 Q8N402 240 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 TRIM63Q969Q1 353 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 SLC6A7Q99884 636 aa12.43□□□□□ -0.42
SEC13-215ENST00000477547 RBMX2Q9Y388 322 aaKnown RBP12.43□□□□□ -0.42
SEC13-215ENST00000477547 MDFIC2A0A1B0GVS7 189 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 ZNF736B4DX44 427 aaPredicted RBP12.42□□□□□ -0.42
SEC13-215ENST00000477547 HAX1O00165 279 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 PMP2P02689 132 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 CSF1P09603 554 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 OR5H8P0DN80 308 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 NFYAP23511 347 aaPredicted RBP12.42□□□□□ -0.42
SEC13-215ENST00000477547 IL3RAP26951 378 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 RAB7AP51149 207 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 TAS2R19P59542 299 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 ZNF45Q02386 682 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 RNASE10Q5GAN6 216 aaKnown RBP12.42□□□□□ -0.42
SEC13-215ENST00000477547 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 LY6G6FQ5SQ64 297 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 LYG1Q8N1E2 194 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 LINC00311Q8N616 119 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 C17orf50Q8WW18 174 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 S100ZQ8WXG8 99 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 CREB3L1Q96BA8 519 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 IFI27L2Q9H2X8 130 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 FAM96BQ9Y3D0 163 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 SOX21Q9Y651 276 aaPredicted RBP12.42□□□□□ -0.42
SEC13-215ENST00000477547 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
SEC13-215ENST00000477547 BUB1B-PAK6H3BSN5 160 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 M0QYG6 137 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 LANCL1O43813 399 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 FBP1P09467 338 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 FAM157CP0CG43 387 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 TBPP20226 339 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 CEACAM3P40198 252 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 ZNF134P52741 427 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 LDLRAD2Q5SZI1 272 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 TRIQKQ629K1 86 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 LYSMD2Q8IV50 215 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 GDPD1Q8N9F7 314 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 TOMM40LQ969M1 308 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 RPEQ96AT9 228 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 THAP7Q9BT49 309 aaPredicted RBP12.41□□□□□ -0.42
SEC13-215ENST00000477547 TOLLIPQ9H0E2 274 aa12.41□□□□□ -0.42
SEC13-215ENST00000477547 C11orf54Q9H0W9 315 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms