RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 UBR4Q5T4S7 5183 aa5.51□□□□□ -1.53
PRPF3-205ENST00000476970 A0A0B4J203 849 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 IGKV1-12A0A0C4DH73 117 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ZAR1LA6NP61 321 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF785A8K8V0 405 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 PRR32B1ATL7 298 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 UBE2CO00762 179 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 IGKV1D-12P01611 117 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ALPLP05186 524 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 DBTP11182 482 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF20P17024 532 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 PRKACGP22612 351 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 SLC2A5P22732 501 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 MECP2P51608 486 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CXCR4P61073 352 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CX3CL1P78423 397 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 DEFB135Q30KP9 77 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 MEDAGQ5VYS4 303 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 UTS2BQ765I0 119 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 AMIGO2Q86SJ2 522 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF575Q86XF7 245 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CPOQ8IVL8 374 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 HS3ST5Q8IZT8 346 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 PACRGLQ8N7B6 248 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 POC5Q8NA72 575 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CNIH3Q8TBE1 160 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 TMEM163Q8TC26 289 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ARL11Q969Q4 196 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 RFT1Q96AA3 541 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CNN2Q99439 309 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 CIB1Q99828 191 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 ZC4H2Q9NQZ6 224 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 MBNL3Q9NUK0 354 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 TVP23BQ9NYZ1 205 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 GNG12Q9UBI6 72 aa5.5□□□□□ -1.53
PRPF3-205ENST00000476970 PEF1Q9UBV8 284 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 WARS2Q9UGM6 360 aaKnown RBP5.5□□□□□ -1.53
PRPF3-205ENST00000476970 IGHV3-43A0A0B4J1X8 118 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 TRAV24A0A0B4J272 114 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 LOC107986453A0A1B0GWG9 222 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 TMEM30CPA0ZSE6 113 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 SAC3D1A6NKF1 404 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 H3BNX3 289 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 EI24O14681 340 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 SHOXO15266 292 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 ORC5O43913 435 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 MITFO75030 526 aaPredicted RBP5.49□□□□□ -1.53
PRPF3-205ENST00000476970 RPSAP08865 295 aaKnown RBP5.49□□□□□ -1.53
PRPF3-205ENST00000476970 UBCP0CG48 685 aaKnown RBP5.49□□□□□ -1.53
PRPF3-205ENST00000476970 IGHV3-43DP0DP04 118 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 ATF1P18846 271 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 VHLP40337 213 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 KIR2DS2P43631 304 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 IL13RA2Q14627 380 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 CDK5R1Q15078 307 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 ANKRD55Q3KP44 614 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 STEAP3Q658P3 488 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 C12orf73Q69YU5 71 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 PLEKHG7Q6ZR37 379 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 LFNGQ8NES3 379 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 BBS1Q8NFJ9 593 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 OR5D18Q8NGL1 313 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 PLPPR1Q8TBJ4 325 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 Q96MT0 163 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 IL4I1Q96RQ9 567 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 APOL4Q9BPW4 351 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 RIBC2Q9H4K1 309 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 TECRQ9NZ01 308 aaKnown RBP5.49□□□□□ -1.53
PRPF3-205ENST00000476970 FBXL17Q9UF56 701 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 FBXL7Q9UJT9 491 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 MYRFQ9Y2G1 1151 aa5.49□□□□□ -1.53
PRPF3-205ENST00000476970 TRAV39A0A0B4J263 110 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 IGKV1-9A0A0C4DH69 117 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF670-ZNF695F2Z2N8 137 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 C15orf65H3BRN8 121 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 RRHO14718 337 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 RTL8CO15255 209 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SLC31A2O15432 143 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SPINT2O43291 252 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 RPP14O95059 124 aaKnown RBP5.48□□□□□ -1.53
PRPF3-205ENST00000476970 KRT8P05787 483 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 ATP6V1E1P36543 226 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 MAP2K4P45985 399 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SNRPGP62308 76 aaKnown RBP5.48□□□□□ -1.53
PRPF3-205ENST00000476970 DYRK1AQ13627 763 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SLC25A30Q5SVS4 291 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 TTC23Q5W5X9 447 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 Q8N1X5 172 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 CBR4Q8N4T8 237 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 TCEANCQ8N8B7 351 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF439Q8NDP4 499 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SETD9Q8NE22 299 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 BVESQ8NE79 360 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 ZNF555Q8NEP9 628 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 OR52B4Q8NGK2 314 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 C11orf45Q8TAV5 145 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 EDARADDQ8WWZ3 215 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 SNAPC3Q92966 411 aa5.48□□□□□ -1.53
PRPF3-205ENST00000476970 CPNE2Q96FN4 548 aaPredicted RBP5.48□□□□□ -1.53
PRPF3-205ENST00000476970 NR1H4Q96RI1 486 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms