RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 C12orf4Q9NQ89 552 aa9.93□□□□□ -0.82
APTX-220ENST00000476858 RNF114Q9Y508 228 aa9.93□□□□□ -0.82
APTX-220ENST00000476858 TMEM235A6NFC5 223 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 GSTT2P0CG29 244 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 GSTT2BP0CG30 244 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 ZNF816Q0VGE8 651 aaPredicted RBP9.92□□□□□ -0.82
APTX-220ENST00000476858 CTF1Q16619 201 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 CDNFQ49AH0 187 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 IGSF11Q5DX21 431 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 GPR107Q5VW38 600 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 C8orf31Q8N9H6 132 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 RTN4IP1Q8WWV3 396 aaPredicted RBP9.92□□□□□ -0.82
APTX-220ENST00000476858 PTX4Q96A99 478 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 C5orf30Q96GV9 206 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 BEX1Q9HBH7 125 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 SERTAD4Q9NUC0 356 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 RHBDL2Q9NX52 303 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 KCNIP1Q9NZI2 227 aa9.92□□□□□ -0.82
APTX-220ENST00000476858 PROP1O75360 226 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 IGKV1D-33P01593 117 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 IGKV1-33P01594 117 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 FCER2P06734 321 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 CEACAM3P40198 252 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 SERPINB10P48595 397 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 RPL15P61313 204 aaKnown RBP9.91□□□□□ -0.82
APTX-220ENST00000476858 HTD2P86397 168 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 ZNF260Q3ZCT1 412 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 RPL39P5Q59GN2 51 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 TRAT1Q6PIZ9 186 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 C10orf99Q6UWK7 81 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 MOB3BQ86TA1 216 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 LYG1Q8N1E2 194 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 C11orf44Q8N8P7 122 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 GALMQ96C23 342 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 ABHD14BQ96IU4 210 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 ZNF251Q9BRH9 671 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 SLC25A33Q9BSK2 321 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 ABHD14AQ9BUJ0 271 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 MRPL20Q9BYC9 149 aaKnown RBP9.91□□□□□ -0.82
APTX-220ENST00000476858 VCX3AQ9NNX9 186 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 SLC23A1Q9UHI7 598 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 JPT1Q9UK76 154 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 RNF150Q9ULK6 438 aa9.91□□□□□ -0.82
APTX-220ENST00000476858 AMMECR1Q9Y4X0 333 aaPredicted RBP9.91□□□□□ -0.82
APTX-220ENST00000476858 SAA2-SAA4A0A096LPE2 208 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 LINC01548A6NM66 108 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 TRDCB7Z8K6 153 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 YPEL1O60688 119 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 SAA2P0DJI9 122 aaPredicted RBP9.9□□□□□ -0.82
APTX-220ENST00000476858 KIR2DS4P43632 304 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 ZNF137PP52743 207 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 ZNF554Q86TJ5 538 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 Q8N2B8 174 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 Q8N6K4 173 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 CREB3L1Q96BA8 519 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 RBM14Q96PK6 669 aaKnown RBP9.9□□□□□ -0.82
APTX-220ENST00000476858 YPEL2Q96QA6 119 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 AGMATQ9BSE5 352 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 MRPS26Q9BYN8 205 aaKnown RBP9.9□□□□□ -0.82
APTX-220ENST00000476858 C11orf54Q9H0W9 315 aaPredicted RBP9.9□□□□□ -0.82
APTX-220ENST00000476858 VWFP04275 2813 aa9.9□□□□□ -0.82
APTX-220ENST00000476858 PKD1L1Q8TDX9 2849 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 TRAV18A0A075B6X5 111 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 OOSP1A8MZH6 123 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 H3BUI4 141 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 FABP7O15540 132 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 OR2F2O95006 317 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 GABARAPO95166 117 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 GAPDHP04406 335 aaKnown RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 EIF4EP06730 217 aaKnown RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 CNTFRP26992 372 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 BRS3P32247 399 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 CEACAM6P40199 344 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 RAB7AP51149 207 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 ARFRP1Q13795 201 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 SPCS2Q15005 226 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 TIMM50Q3ZCQ8 353 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 ABCA11PQ4W5N1 156 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 GLDNQ6ZMI3 551 aaPredicted RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 MOB1BQ7L9L4 216 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 ANKRD13BQ86YJ7 626 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 KLHDC1Q8N7A1 406 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 GVQW1Q8N7I0 195 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 OR4C13Q8NGP0 309 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 WIPF2Q8TF74 440 aaPredicted RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 SLC25A46Q96AG3 418 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 EAF1Q96JC9 268 aaPredicted RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 CITED1Q99966 193 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 NABP2Q9BQ15 211 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 NPFFR1Q9GZQ6 430 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 RIMS4Q9H426 269 aaPredicted RBP9.89□□□□□ -0.83
APTX-220ENST00000476858 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.89□□□□□ -0.83
APTX-220ENST00000476858 PLSCR3Q9NRY6 295 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 ABRACLQ9P1F3 81 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 SPATA2Q9UM82 520 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 FBN3Q75N90 2809 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 TRRAPQ9Y4A5 3859 aa9.89□□□□□ -0.83
APTX-220ENST00000476858 METTL21EPA6NDL7 271 aa9.88□□□□□ -0.83
APTX-220ENST00000476858 MEIS3P1A6NDR6 274 aa9.88□□□□□ -0.83
APTX-220ENST00000476858 POM121CA8CG34 1229 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms