RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 NDUFA3O95167 84 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 HSPB1P04792 205 aaKnown RBP9.14□□□□□ -0.95
HDAC6-219ENST00000476625 ALPLP05186 524 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 LIMS3P0CW19 117 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 LIMS4P0CW20 117 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 VEGFCP49767 419 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 LINC00205P59089 165 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 SMN1Q16637 294 aaKnown RBP9.14□□□□□ -0.95
HDAC6-219ENST00000476625 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 NPBQ8NG41 125 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 MRPL30Q8TCC3 161 aaKnown RBP9.14□□□□□ -0.95
HDAC6-219ENST00000476625 RDH12Q96NR8 316 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 SPATA25Q9BR10 227 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 CHCHD6Q9BRQ6 235 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 TMED9Q9BVK6 235 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 GHITMQ9H3K2 345 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 PEX16Q9Y5Y5 336 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 SELENOKQ9Y6D0 94 aa9.14□□□□□ -0.95
HDAC6-219ENST00000476625 MCRIP1C9JLW8 97 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 HSPA12AO43301 675 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 BAG2O95816 211 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 TRBV12-3P01733 135 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 IGFBP3P17936 291 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 BDKRB2P30411 391 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 ETV1P50549 477 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 GBX2P52951 348 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 Q3ZCU0 254 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 SLC25A30Q5SVS4 291 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 C6orf183Q5T699 404 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 GLIPR1L1Q6UWM5 242 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 IL34Q6ZMJ4 242 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 PPP1R27Q86WC6 154 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 SGPP2Q8IWX5 399 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 GAPTQ8N292 157 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 STX19Q8N4C7 294 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 LFNGQ8NES3 379 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 APH1BQ8WW43 257 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 PYDC1Q8WXC3 89 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 MRPS24Q96EL2 167 aaKnown RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 CENPNQ96H22 339 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 RHOVQ96L33 236 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 THAP7Q9BT49 309 aaPredicted RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 KCNK15Q9H427 330 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 PLEKHA3Q9HB20 300 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 TMEM138Q9NPI0 162 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 MRPS28Q9Y2Q9 187 aaKnown RBP9.13□□□□□ -0.95
HDAC6-219ENST00000476625 NUBP2Q9Y5Y2 271 aa9.13□□□□□ -0.95
HDAC6-219ENST00000476625 A8MZ25 164 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 RRHO14718 337 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 CA2P00918 260 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 TRGV3P03979 118 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 MAS1P04201 325 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 GTF2F2P13984 249 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 EDN2P20800 178 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 CRIP2P52943 208 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-219ENST00000476625 PLGLAQ15195 96 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 ACTBL2Q562R1 376 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 C1orf146Q5VVC0 180 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 MEDAGQ5VYS4 303 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 LINC00596Q86U02 117 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 LYPD6Q86Y78 171 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 ANKRD13BQ86YJ7 626 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 GPR148Q8TDV2 347 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 TRUB1Q8WWH5 349 aaKnown RBP9.12□□□□□ -0.95
HDAC6-219ENST00000476625 FAM46BQ96A09 425 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 CPNE2Q96FN4 548 aaPredicted RBP9.12□□□□□ -0.95
HDAC6-219ENST00000476625 ABHD14BQ96IU4 210 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 S100A13Q99584 98 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 SELENOIQ9C0D9 397 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 CNOT2Q9NZN8 540 aaKnown RBP9.12□□□□□ -0.95
HDAC6-219ENST00000476625 STUB1Q9UNE7 303 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 GMPPBQ9Y5P6 360 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 FRAS1Q86XX4 4008 aa9.12□□□□□ -0.95
HDAC6-219ENST00000476625 ARPC1BO15143 372 aaKnown RBP9.11□□□□□ -0.95
HDAC6-219ENST00000476625 RBMXL2O75526 392 aaKnown RBP9.11□□□□□ -0.95
HDAC6-219ENST00000476625 BRI3O95415 125 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 CT45A6P0DMU7 189 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 CT45A5P0DMU8 189 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 CT45A7P0DMV0 189 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 PPP3R1P63098 170 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 SSBP2P81877 361 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-219ENST00000476625 RIPK1Q13546 671 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 DYRK1AQ13627 763 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 JAGN1Q8N5M9 183 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 DRAXINQ8NBI3 349 aaPredicted RBP9.11□□□□□ -0.95
HDAC6-219ENST00000476625 OR5T1Q8NG75 326 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 GRPEL2Q8TAA5 225 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 SULT4A1Q9BR01 284 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 CST11Q9H112 138 aa9.11□□□□□ -0.95
HDAC6-219ENST00000476625 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
HDAC6-219ENST00000476625 PNMA8CA0A1B0GUJ8 204 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 CRTAPO75718 401 aaPredicted RBP9.1□□□□□ -0.95
HDAC6-219ENST00000476625 SC5DO75845 299 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 JTBO76095 146 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 CD2P06729 351 aa9.1□□□□□ -0.95
HDAC6-219ENST00000476625 APELAP0DMC3 54 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms