RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 NAPSAO96009 420 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 PPP1CCP36873 323 aaKnown RBP12.87□□□□□ -0.35
COL1A1-205ENST00000476387 ZNF137PP52743 207 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 MORN2Q502X0 79 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 CT45A1Q5HYN5 189 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 IZUMO1Q8IYV9 350 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 CT45A3Q8NHU0 189 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 ST6GALNAC6Q969X2 333 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 C12orf4Q9NQ89 552 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 RAB22AQ9UL26 194 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 MGAT4AQ9UM21 535 aa12.87□□□□□ -0.35
COL1A1-205ENST00000476387 SHISA3A0PJX4 238 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 SH2D7A6NKC9 451 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 FGF16O43320 207 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 AMY1AP04745 511 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 AMY2AP04746 511 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 ZNF134P52741 427 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 KCTD21Q4G0X4 260 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 OXLD1Q5BKU9 147 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 CENPVQ7Z7K6 275 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 C5orf56Q8N8D9 126 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 OR2AK2Q8NG84 335 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 OR2T10Q8NGZ9 312 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 ARHGAP5-AS1Q96IT6 56 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 HDHD3Q9BSH5 251 aaPredicted RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 PECRQ9BY49 303 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 TXNL4BQ9NX01 149 aaKnown RBP12.86□□□□□ -0.35
COL1A1-205ENST00000476387 SSR3Q9UNL2 185 aa12.86□□□□□ -0.35
COL1A1-205ENST00000476387 TRBV6-6A0A0A6YYG2 114 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 FOXI3A8MTJ6 420 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-205ENST00000476387 LDLRAD4O15165 306 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 YPEL1O60688 119 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 GADD45AP24522 165 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 CD1BP29016 333 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-205ENST00000476387 HLA-DRB3P79483 266 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 NEDD8Q15843 81 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 ZNF880Q6PDB4 577 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 Q6ZPA2 131 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 C5orf24Q7Z6I8 188 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 EAF1Q96JC9 268 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-205ENST00000476387 YPEL2Q96QA6 119 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
COL1A1-205ENST00000476387 TSSC4Q9Y5U2 329 aaPredicted RBP12.85□□□□□ -0.35
COL1A1-205ENST00000476387 NCBP2LA6PVI3 153 aaKnown RBP12.84□□□□□ -0.35
COL1A1-205ENST00000476387 LANCL1O43813 399 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 MOSP00540 346 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 PRB2P02812 416 aaPredicted RBP12.84□□□□□ -0.35
COL1A1-205ENST00000476387 RAB6AP20340 208 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 EBI3Q14213 229 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 TCTEX1D4Q5JR98 221 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 LY6G6FQ5SQ64 297 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 OR4X2Q8NGF9 303 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 PHF21AQ96BD5 680 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 RAB3CQ96E17 227 aa12.84□□□□□ -0.35
COL1A1-205ENST00000476387 A0A1W2PRX2 142 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 SMIM30A4D0T7 59 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 METTL21EPA6NDL7 271 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 NOTOA8MTQ0 251 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 HSPA12AO43301 675 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 CD3GP09693 182 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 PF4V1P10720 104 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 TMEM50BP56557 158 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 PLA2G7Q13093 441 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 PLAC9Q5JTB6 97 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 SLC23A1Q9UHI7 598 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 DNAH3Q8TD57 4116 aa12.83□□□□□ -0.36
COL1A1-205ENST00000476387 SAA2-SAA4A0A096LPE2 208 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 A0A0B4J203 849 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 SAA2P0DJI9 122 aaPredicted RBP12.82□□□□□ -0.36
COL1A1-205ENST00000476387 CD33P20138 364 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 ZBTB25P24278 435 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 LSAMPQ13449 338 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 SLC35E3Q7Z769 313 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 TPRA1Q86W33 373 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 Q8N6K4 173 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 OR8H1Q8NGG4 311 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 OR10R2Q8NGX6 335 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 EDARADDQ8WWZ3 215 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 PTX4Q96A99 478 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 KCTD7Q96MP8 289 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 CHCHD6Q9BRQ6 235 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 MRPL20Q9BYC9 149 aaKnown RBP12.82□□□□□ -0.36
COL1A1-205ENST00000476387 OR51E2Q9H255 320 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 Q9N2K0 584 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
COL1A1-205ENST00000476387 A0A075B6Q4 140 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 LOC100506127A0A0U1RQW1 187 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 SERPINE3A8MV23 424 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 ZNF736B4DX44 427 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-205ENST00000476387 ST8SIA5O15466 376 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 SLC2A2P11168 524 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-205ENST00000476387 MOGAT2Q3SYC2 334 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 KHDC1LQ5JSQ8 128 aa12.81□□□□□ -0.36
COL1A1-205ENST00000476387 FAM71F2Q6NXP2 309 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms