RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 P2RY1P47900 373 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 KHDC3LQ587J8 217 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 ZNF324BQ6AW86 544 aaPredicted RBP13.53□□□□□ -0.24
VARS2-207ENST00000476162 CMTM1Q8IZ96 169 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 WDR31Q8NA23 367 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 IL1F10Q8WWZ1 152 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 GPR61Q9BZJ8 451 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 WFDC1Q9HC57 220 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 OR2W1Q9Y3N9 320 aa13.53□□□□□ -0.24
VARS2-207ENST00000476162 PRR33A8MZF0 331 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 PGLYRP1O75594 196 aaPredicted RBP13.52□□□□□ -0.24
VARS2-207ENST00000476162 OR2C1O95371 312 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 IGKV3-15P01624 115 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 MBP02144 154 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 SOD3P08294 240 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 SNRPCP09234 159 aaKnown RBP13.52□□□□□ -0.24
VARS2-207ENST00000476162 COX5AP20674 150 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 HOXC12P31275 282 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 RPS23P62266 143 aaKnown RBP13.52□□□□□ -0.24
VARS2-207ENST00000476162 GPR157Q5UAW9 335 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 IGF2-ASQ6U949 168 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 Q8IYB0 196 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 TAAR6Q96RI8 345 aa13.52□□□□□ -0.24
VARS2-207ENST00000476162 ERRFI1Q9UJM3 462 aaPredicted RBP13.52□□□□□ -0.24
VARS2-207ENST00000476162 SLC33A1O00400 549 aaPredicted RBP13.52□□□□□ -0.25
VARS2-207ENST00000476162 NXPH2O95156 264 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 PGA5P0DJD9 388 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 UCP1P25874 307 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 GNMTQ14749 295 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 ACSF3Q4G176 576 aaPredicted RBP13.52□□□□□ -0.25
VARS2-207ENST00000476162 GFI1BQ5VTD9 330 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 Q6ZRG5 221 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 H1FOOQ8IZA3 346 aaPredicted RBP13.52□□□□□ -0.25
VARS2-207ENST00000476162 ZNF610Q8N9Z0 462 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 BEND2Q8NDZ0 799 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 OR5R1Q8NH85 324 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 NDUFAF3Q9BU61 184 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 OR1A1Q9P1Q5 309 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 PRR14LQ5THK1 2151 aa13.52□□□□□ -0.25
VARS2-207ENST00000476162 ELOA3CA0A087WX78 387 aaPredicted RBP13.51□□□□□ -0.25
VARS2-207ENST00000476162 ADAM20O43506 726 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 G0S2P27469 103 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 SNCAP37840 140 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 PRR18Q8N4B5 295 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 CABLES2Q9BTV7 478 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 OBP2BQ9NPH6 170 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 OR5H1A6NKK0 313 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 NKX2-1P43699 371 aaPredicted RBP13.51□□□□□ -0.25
VARS2-207ENST00000476162 ZNF497Q6ZNH5 498 aa13.51□□□□□ -0.25
VARS2-207ENST00000476162 DSPP15924 2871 aaKnown RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 ZNF891A8MT65 544 aaPredicted RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 PPP1R2P9O14990 202 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BKO60814 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 WDR1O75083 606 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 CEACAM4O75871 244 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BJP06899 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BOP23527 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BBP33778 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 MDH2P40926 338 aaKnown RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BDP58876 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BCP62807 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 ZNF146Q15072 292 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST2H2BEQ16778 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 CXorf66Q5JRM2 361 aaPredicted RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 CXorf67Q86X51 503 aaPredicted RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 C1orf162Q8NEQ5 155 aaPredicted RBP13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BHQ93079 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 SPIN2AQ99865 258 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BNQ99877 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 HIST1H2BMQ99879 126 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 SPIN2BQ9BPZ2 258 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 PLSCR4Q9NRQ2 329 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 DKK4Q9UBT3 224 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 TRAPPC2LQ9UL33 140 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 PTPRBP23467 1997 aa13.5□□□□□ -0.25
VARS2-207ENST00000476162 BORCS7-ASMTA0A0B4J1R7 106 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 H0Y980 276 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 VDAC1P21796 283 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 F2RP25116 425 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 GUK1Q16774 197 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 NMSQ5H8A3 153 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 ALKBH2Q6NS38 261 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 OR5D13Q8NGL4 314 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 UBALD1Q8TB05 177 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 MUCL1Q96DR8 90 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 BOD1Q96IK1 185 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 NOL4LQ96MY1 436 aaPredicted RBP13.49□□□□□ -0.25
VARS2-207ENST00000476162 ATG101Q9BSB4 218 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 PARP12Q9H0J9 701 aaKnown RBP13.49□□□□□ -0.25
VARS2-207ENST00000476162 MAGT1Q9H0U3 335 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 C11orf1Q9H5F2 150 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 SVILO95425 2214 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 FAM24AA6NFZ4 105 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 AHRRA9YTQ3 701 aa13.49□□□□□ -0.25
VARS2-207ENST00000476162 SH2D1BO14796 132 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms