RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 ZNRF1Q8ND25 227 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 DCTN5Q9BTE1 182 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 MAGT1Q9H0U3 335 aa12.84□□□□□ -0.35
RPUSD3-215ENST00000475470 SSSCA1O60232 199 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 GAPDHP04406 335 aaKnown RBP12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 FGF2P09038 288 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 OR4A8P0C604 315 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 ZP3P21754 424 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 CD80P33681 288 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 PPP1CCP36873 323 aaKnown RBP12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 FAM201AQ5SY85 155 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 ZBTB34Q8NCN2 500 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 TOLLIPQ9H0E2 274 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 ESRP2Q9H6T0 727 aaKnown RBP12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 TAS2R3Q9NYW6 316 aa12.83□□□□□ -0.35
RPUSD3-215ENST00000475470 ODAMA1E959 279 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 FGF16O43320 207 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 GZMHP20718 246 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 VAMP2P63027 116 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 ID3Q02535 119 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 ADIPOQQ15848 244 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 OR2C3Q8N628 320 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 GPR146Q96CH1 333 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 WFIKKN1Q96NZ8 548 aa12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 MS4A7Q9GZW8 240 aaPredicted RBP12.83□□□□□ -0.36
RPUSD3-215ENST00000475470 IGHV3-43A0A0B4J1X8 118 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 A0A1B0GU03 582 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 A8MXK9 166 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 K7N7A8 449 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 WRBO00258 174 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 NXPH3O95157 252 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 IGHV3-43DP0DP04 118 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 CAV2P51636 162 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 KLRB1Q12918 225 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 ZNF808Q8N4W9 903 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 EIF4E3Q8N5X7 224 aaKnown RBP12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 BSCL2Q96G97 398 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 NGBQ9NPG2 151 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 CACNA1DQ01668 2161 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 BORCS7-ASMTA0A0B4J1R7 106 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 A0A0G2JRQ6 117 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 C15orf65H3BRN8 121 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 TSPAN4O14817 238 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 CYB5R3P00387 301 aaPredicted RBP12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 ADH4P08319 380 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 IRF2P14316 349 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 AKR1C2P52895 323 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 EDDM3BP56851 147 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 NHLH2Q02577 135 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 BTN1A1Q13410 526 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 LTC4SQ16873 150 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 ADAM5Q6NVV9 412 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 ICE1Q9Y2F5 2266 aa12.82□□□□□ -0.36
RPUSD3-215ENST00000475470 PCNX1Q96RV3 2341 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 FAM24AA6NFZ4 105 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 VSTM5A8MXK1 200 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 ATXN7O15265 892 aaPredicted RBP12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 SLC25A6P12236 298 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 HTD2P86397 168 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 UBAC2Q8NBM4 344 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 FAM222BQ8WU58 562 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 LSM10Q969L4 123 aaKnown RBP12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 C11orf1Q9H5F2 150 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 ZNF705EA8MWA4 302 aaPredicted RBP12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 DEFB108AA8MXU0 73 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 FBXO24O75426 580 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 FAM157CP0CG43 387 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 CCL8P80075 99 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 EWSR1Q01844 656 aaKnown RBP eCLIP12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 ZNF561Q8N587 486 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 OR1S2Q8NGQ3 325 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 Q8TCH9 128 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 DIRC2Q96SL1 478 aa12.81□□□□□ -0.36
RPUSD3-215ENST00000475470 PLCE1Q9P212 2302 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 MMP9P14780 707 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 TNFRSF1AP19438 455 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 STPG2Q8N412 459 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 DEFB108BQ8NET1 73 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 SLC25A31Q9H0C2 315 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 LYRM2Q9NU23 88 aaPredicted RBP12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 C17orf100A8MU93 164 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 KRBOX1C9JBD0 128 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 CHST1O43916 411 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 PITX3O75364 302 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 ATF4P18848 351 aaPredicted RBP12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 CATR1Q13166 79 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 GNG12Q9UBI6 72 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 LPAR3Q9UBY5 353 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 CACNG5Q9UF02 275 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 PSG11Q9UQ72 335 aa12.8□□□□□ -0.36
RPUSD3-215ENST00000475470 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 IGKV1-5P01602 117 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 CA7P43166 264 aa12.79□□□□□ -0.36
RPUSD3-215ENST00000475470 LPAR6P43657 344 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms