RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
VARS-223ENST00000474643 GNG12Q9UBI6 72 aa12.11□□□□□ -0.47
VARS-223ENST00000474643 DAPK2Q9UIK4 370 aa12.11□□□□□ -0.47
VARS-223ENST00000474643 A0A087X0M5 115 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 A0A0A6YYD4 124 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 A0A0B4J203 849 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 A0A1B0GX30 115 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 TCRBV4S1A1TA0A5B7 111 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 METTL21EPA6NDL7 271 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 M0QZK8 103 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 OR2F2O95006 317 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 PRB2P02812 416 aaPredicted RBP12.1□□□□□ -0.47
VARS-223ENST00000474643 FAM106CPP0CH98 169 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 RCC1P18754 421 aaPredicted RBP12.1□□□□□ -0.47
VARS-223ENST00000474643 TGFBR1P36897 503 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 HLA-DRB5Q30154 266 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 BEAN1Q3B7T3 259 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 SAMD5Q5TGI4 173 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 OR10X1Q8NGY0 326 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
VARS-223ENST00000474643 LINC00574Q9H8X3 128 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 TAF9BQ9HBM6 251 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 SPATA2Q9UM82 520 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 PSG11Q9UQ72 335 aa12.1□□□□□ -0.47
VARS-223ENST00000474643 A0A075B6Q4 140 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 A0A0A6YYH2 397 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 A6NJ64 397 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 OOSP1A8MZH6 123 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 C12orf77C9JDV5 145 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 C15orf65H3BRN8 121 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 J3QR06 171 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 IGLV1-47P01700 117 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 HBZP02008 142 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 CLEC2LP0C7M8 214 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 MZT2AQ6P582 158 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 Q6ZS46 218 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 OR10V1Q8NGI7 309 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 MRAPQ8TCY5 172 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 RAB3CQ96E17 227 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 ARHGAP5-AS1Q96IT6 56 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 RBM14Q96PK6 669 aaKnown RBP12.09□□□□□ -0.47
VARS-223ENST00000474643 CMSS1Q9BQ75 279 aaKnown RBP12.09□□□□□ -0.47
VARS-223ENST00000474643 ATG5Q9H1Y0 275 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 GFOD1Q9NXC2 390 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 AK3Q9UIJ7 227 aa12.09□□□□□ -0.47
VARS-223ENST00000474643 PRKDCP78527 4128 aaKnown RBP12.09□□□□□ -0.47
VARS-223ENST00000474643 A0A1W2PPE3 182 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 PLA2G7Q13093 441 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 TMEM30BQ3MIR4 351 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 OXLD1Q5BKU9 147 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 IDNKQ5T6J7 187 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 FOXB2Q5VYV0 432 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 GAPTQ8N292 157 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 OR52M1Q8NGK5 317 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 GALMQ96C23 342 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 CYYR1Q96J86 154 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 PECRQ9BY49 303 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 WNT10AQ9GZT5 417 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 NXF2Q9GZY0 626 aaKnown RBP12.08□□□□□ -0.48
VARS-223ENST00000474643 ABCG5Q9H222 651 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 RIMS4Q9H426 269 aaPredicted RBP12.08□□□□□ -0.48
VARS-223ENST00000474643 HSF4Q9ULV5 492 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 MOB4Q9Y3A3 225 aa12.08□□□□□ -0.48
VARS-223ENST00000474643 TSSC4Q9Y5U2 329 aaPredicted RBP12.08□□□□□ -0.48
VARS-223ENST00000474643 TPPPO94811 219 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 CD3GP09693 182 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 SNRPBP14678 240 aaKnown RBP12.07□□□□□ -0.48
VARS-223ENST00000474643 IL3RAP26951 378 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 ARL6IP1Q15041 203 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 UTF1Q5T230 341 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 MOB1BQ7L9L4 216 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 OR10R2Q8NGX6 335 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 OR56B4Q8NH76 319 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 PHF21AQ96BD5 680 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 OCSTAMPQ9BR26 566 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 SLIRPQ9GZT3 109 aaKnown RBP12.07□□□□□ -0.48
VARS-223ENST00000474643 OR2S2Q9NQN1 319 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 MBNL3Q9NUK0 354 aaKnown RBP12.07□□□□□ -0.48
VARS-223ENST00000474643 NECAP2Q9NVZ3 263 aa12.07□□□□□ -0.48
VARS-223ENST00000474643 SH2D7A6NKC9 451 aaPredicted RBP12.06□□□□□ -0.48
VARS-223ENST00000474643 TMEM11P17152 192 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 RAB7AP51149 207 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 TMEM50BP56557 158 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 ARFRP1Q13795 201 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 LINC00299Q6ZSB3 139 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 ZNF554Q86TJ5 538 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 HDHD3Q9BSH5 251 aaPredicted RBP12.06□□□□□ -0.48
VARS-223ENST00000474643 C12orf4Q9NQ89 552 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 MGAT4AQ9UM21 535 aa12.06□□□□□ -0.48
VARS-223ENST00000474643 RGS11O94810 467 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 APOA1P02647 267 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 SNRNP70P08621 437 aaKnown RBP12.05□□□□□ -0.48
VARS-223ENST00000474643 GNB3P16520 340 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 TALDO1P37837 337 aa12.05□□□□□ -0.48
VARS-223ENST00000474643 LOXL3P58215 753 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms