RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 VEGFCP49767 419 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 STEAP3Q658P3 488 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 CD200R1LQ6Q8B3 271 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 ZNF329Q86UD4 541 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 Q8N9W7 124 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 SETD6Q8TBK2 473 aa14.19□□□□□ -0.14
UPF3A-203ENST00000474056 TMEM272A0A1B0GTI8 110 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 PSMB11A5LHX3 300 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 LDLRAD4O15165 306 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 DENRO43583 198 aaKnown RBP14.18□□□□□ -0.14
UPF3A-203ENST00000474056 LANCL1O43813 399 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 IGHG2P01859 326 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 OR10A3P58181 314 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 LSAMPQ13449 338 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 C2orf76Q3KRA6 126 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 KHDC1LQ5JSQ8 128 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 SAMD5Q5TGI4 173 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 MOB1BQ7L9L4 216 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 SLC35E3Q7Z769 313 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 IL1F10Q8WWZ1 152 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 ARHGAP5-AS1Q96IT6 56 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 PLSCR3Q9NRY6 295 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 ABRACLQ9P1F3 81 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 STEAP1Q9UHE8 339 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 LRRC42Q9Y546 428 aa14.18□□□□□ -0.14
UPF3A-203ENST00000474056 TSSC4Q9Y5U2 329 aaPredicted RBP14.18□□□□□ -0.14
UPF3A-203ENST00000474056 TRBV6-6A0A0A6YYG2 114 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 TRAV1-2A0A0B4J238 106 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 TRDV1A0A1B0GX56 115 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 LINC01548A6NM66 108 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 SERPINE3A8MV23 424 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 MRPS14O60783 128 aaKnown RBP14.17□□□□□ -0.14
UPF3A-203ENST00000474056 RGS11O94810 467 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 F2RL1P55085 397 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 BEAN1Q3B7T3 259 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 LY6G6FQ5SQ64 297 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 UBE2UQ5VVX9 321 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 SPARTQ8N0X7 666 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 PECRQ9BY49 303 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 Q9H521 79 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 LIN7CQ9NUP9 197 aaKnown RBP14.17□□□□□ -0.14
UPF3A-203ENST00000474056 HSF4Q9ULV5 492 aa14.17□□□□□ -0.14
UPF3A-203ENST00000474056 SAA2-SAA4A0A096LPE2 208 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 PDCD5O14737 125 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 ST8SIA5O15466 376 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 SAA2P0DJI9 122 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-203ENST00000474056 PF4V1P10720 104 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 MYL9P24844 172 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 OR3A3P47888 321 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 PSMD7P51665 324 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 HLA-DRB3P79483 266 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 FAM71E2Q8N5Q1 922 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 OR2AK2Q8NG84 335 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 OR56B1Q8NGI3 324 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 CHPT1Q8WUD6 406 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 S1PR3Q99500 378 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 NABP2Q9BQ15 211 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 MRPL20Q9BYC9 149 aaKnown RBP14.16□□□□□ -0.14
UPF3A-203ENST00000474056 PARP12Q9H0J9 701 aaKnown RBP14.16□□□□□ -0.14
UPF3A-203ENST00000474056 ABCG5Q9H222 651 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 IFI27L2Q9H2X8 130 aa14.16□□□□□ -0.14
UPF3A-203ENST00000474056 RIMS4Q9H426 269 aaPredicted RBP14.16□□□□□ -0.14
UPF3A-203ENST00000474056 RAB3BP20337 219 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 PSMB9P28065 219 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 GPR12P47775 334 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 MOGAT2Q3SYC2 334 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 PLAC9Q5JTB6 97 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 C22orf42Q6IC83 251 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 ZNF833PQ6ZTB9 187 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 STPG2Q8N412 459 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 Q9N2K0 584 aa14.15□□□□□ -0.14
UPF3A-203ENST00000474056 DNAH3Q8TD57 4116 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 A0A0B4J203 849 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 IFITM5A6NNB3 132 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 RANBP1P43487 201 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 OXLD1Q5BKU9 147 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 NR2C2APQ86WQ0 139 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 FOXRED2Q8IWF2 684 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 RASL11BQ9BPW5 248 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 CMSS1Q9BQ75 279 aaKnown RBP14.14□□□□□ -0.15
UPF3A-203ENST00000474056 HSPB9Q9BQS6 159 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 YTHDF1Q9BYJ9 559 aaKnown RBP14.14□□□□□ -0.15
UPF3A-203ENST00000474056 C12orf4Q9NQ89 552 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 OR1A1Q9P1Q5 309 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 SLC23A1Q9UHI7 598 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 RAB22AQ9UL26 194 aa14.14□□□□□ -0.15
UPF3A-203ENST00000474056 SMIM30A4D0T7 59 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 PF4P02776 101 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 SCTP09683 121 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 GALP22466 123 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 MMDQ15546 238 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 KPRPQ5T749 579 aaPredicted RBP14.13□□□□□ -0.15
UPF3A-203ENST00000474056 OR8H1Q8NGG4 311 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 ZNF251Q9BRH9 671 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 MGAT4AQ9UM21 535 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 KCNK7Q9Y2U2 307 aa14.13□□□□□ -0.15
UPF3A-203ENST00000474056 AP4M1O00189 453 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 SLC2A2P11168 524 aaPredicted RBP14.12□□□□□ -0.15
UPF3A-203ENST00000474056 CD33P20138 364 aa14.12□□□□□ -0.15
UPF3A-203ENST00000474056 CNTFRP26992 372 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms