RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 IGFL2Q6UWQ7 119 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 DPPA3Q6W0C5 159 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 H1FOOQ8IZA3 346 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SELENOHQ8IZQ5 122 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SUMF1Q8NBK3 374 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SCCPDHQ8NBX0 429 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 ZBTB34Q8NCN2 500 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 FDCSPQ8NFU4 85 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 OR4D5Q8NGN0 318 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 OR11L1Q8NGX0 322 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 LHFPL5Q8TAF8 219 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC25A40Q8TBP6 338 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 SCGB1C1Q8TD33 95 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 RAB40CQ96S21 281 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 TP53RKQ96S44 253 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 CLCC1Q96S66 551 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 GINS3Q9BRX5 216 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 C1QTNF6Q9BXI9 259 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2J1Q9GZK6 312 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 LYRM2Q9NU23 88 aaPredicted RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 C11orf21Q9P2W6 132 aa4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 CARHSP1Q9Y2V2 147 aaKnown RBP4.97□□□□□ -1.61
ATPAF1-204ENST00000474020 KMT2EQ8IZD2 1858 aa4.96□□□□□ -1.61
ATPAF1-204ENST00000474020 USP24Q9UPU5 2620 aa4.96□□□□□ -1.61
ATPAF1-204ENST00000474020 FAM186AA6NE01 2351 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 TRAV24A0A0B4J272 114 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 NKX2-6A6NCS4 301 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 OOEPA6NGQ2 149 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 RNASEK-C17orf49H0YIS7 233 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 H7C2Y5 167 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 SPINT2O43291 252 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 KCNAB3O43448 404 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ADAM20O43506 726 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 PGLYRP1O75594 196 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 LYZL6O75951 148 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 OR2H2O95918 312 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 HAND1O96004 215 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 GRPP07492 148 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 WNT2P09544 360 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 PGA5P0DJD9 388 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 COX5AP20674 150 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 PMP22Q01453 160 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 EWSR1Q01844 656 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 TLE4Q04727 773 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF273Q14593 569 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 TSC22D1Q15714 1073 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 IGFBP7Q16270 282 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 AKR1C8PQ5T2L2 129 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF880Q6PDB4 577 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF497Q6ZNH5 498 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF818PQ6ZRF7 136 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 BHLHA15Q7RTS1 189 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 MRGPRGQ86SM5 289 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM219AQ8IW50 185 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 GCNT2Q8N0V5 402 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 TCTEX1D1Q8N7M0 179 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 BOLLQ8N9W6 283 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 CLRN3Q8NCR9 226 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 OR8G5Q8NG78 346 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM216AQ8WUB2 273 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 LSM10Q969L4 123 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 GALMQ96C23 342 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 MUCL1Q96DR8 90 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 BOD1Q96IK1 185 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 NRIP2Q9BQI9 281 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 EIF5A2Q9GZV4 153 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 LIME1Q9H400 295 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 SMDT1Q9H4I9 107 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ASCL3Q9NQ33 180 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 CCL28Q9NRJ3 127 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 C19orf12Q9NSK7 152 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 UQCC1Q9NVA1 299 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 COQ3Q9NZJ6 369 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 OR14J1Q9UGF5 321 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 CACFD1Q9UGQ2 172 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 ERRFI1Q9UJM3 462 aaPredicted RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 PURGQ9UJV8 347 aaKnown RBP4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 RNF150Q9ULK6 438 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 LAMP3Q9UQV4 416 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 DNAH14Q0VDD8 3507 aa4.96□□□□□ -1.62
ATPAF1-204ENST00000474020 NCOA6Q14686 2063 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 VPS13AQ96RL7 3174 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CLEC18AA5D8T8 446 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM90A26D6RGX4 464 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 IFNL4K9M1U5 179 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 SLC33A1O00400 549 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ABCD4O14678 606 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CDIPTO14735 213 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 WDR1O75083 606 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 SFTA3P0C7M3 94 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 DANCRP0C864 163 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FAM157CP0CG43 387 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 SPP1P10451 314 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 RCC1P18754 421 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 KITLGP21583 273 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 LPAR6P43657 344 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 NOVA1P51513 510 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 FLI1Q01543 452 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 CLINT1Q14677 625 aa4.95□□□□□ -1.62
ATPAF1-204ENST00000474020 ZNF146Q15072 292 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms