RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 HIPK2Q9H2X6 1198 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 BANF2Q9H503 90 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 IMPAD1Q9NX62 359 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 ETAA1Q9NY74 926 aa9.61□□□□□ -0.87
TRAF4-209ENST00000473421 TRAV8-7A0A075B6U6 113 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 SAA2-SAA4A0A096LPE2 208 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 UBE2QL1A1L167 161 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 ANKRD34BA5PLL1 514 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 MAGEB3O15480 346 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 JTBO76095 146 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 CSTBP04080 98 aaKnown RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 LIMS3P0CW19 117 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 LIMS4P0CW20 117 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 SAA2P0DJI9 122 aaPredicted RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 RPL39P5Q59GN2 51 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 RAB12Q6IQ22 244 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 LINC00322Q6ZN03 302 aaPredicted RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 SGPP2Q8IWX5 399 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 LFNGQ8NES3 379 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 OR52I1Q8NGK6 324 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 TRUB1Q8WWH5 349 aaKnown RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 TMEM106AQ96A25 262 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 RDH12Q96NR8 316 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 ZNF184Q99676 751 aaPredicted RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 ABHD14AQ9BUJ0 271 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 TMED9Q9BVK6 235 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 IFI27L2Q9H2X8 130 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 TMEM138Q9NPI0 162 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 CNOT2Q9NZN8 540 aaKnown RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 ENOPH1Q9UHY7 261 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 STUB1Q9UNE7 303 aa9.6□□□□□ -0.87
TRAF4-209ENST00000473421 MRPS28Q9Y2Q9 187 aaKnown RBP9.6□□□□□ -0.87
TRAF4-209ENST00000473421 RRHO14718 337 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 RBMXL2O75526 392 aaKnown RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 BRI3O95415 125 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 LALBAP00709 142 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 TRBV12-3P01733 135 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 ALPLP05186 524 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 IGFBP3P17936 291 aaPredicted RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 BDKRB2P30411 391 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 TPPP2P59282 170 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 SSBP2P81877 361 aaPredicted RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 ACTBL2Q562R1 376 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 ZNF660Q6AZW8 331 aaPredicted RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 LINC00596Q86U02 117 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 PPP1R27Q86WC6 154 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 ANKRD13BQ86YJ7 626 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 MRPL30Q8TCC3 161 aaKnown RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 MUL1Q969V5 352 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 FLYWCH2Q96CP2 140 aaKnown RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 MBNL3Q9NUK0 354 aaKnown RBP9.59□□□□□ -0.87
TRAF4-209ENST00000473421 PEX16Q9Y5Y5 336 aa9.59□□□□□ -0.87
TRAF4-209ENST00000473421 MCRIP1C9JLW8 97 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 ARPC1BO15143 372 aaKnown RBP9.58□□□□□ -0.88
TRAF4-209ENST00000473421 ST8SIA5O15466 376 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 PROP1O75360 226 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 SC5DO75845 299 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 RGS11O94810 467 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 GTF2F2P13984 249 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 GBX2P52951 348 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-209ENST00000473421 SYNJ2BPP57105 145 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 RAB40BQ12829 278 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 KLF5Q13887 457 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-209ENST00000473421 OR2G6Q5TZ20 316 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 MEDAGQ5VYS4 303 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 CD200R1LQ6Q8B3 271 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 STX19Q8N4C7 294 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 GPR148Q8TDV2 347 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 ABHD5Q8WTS1 349 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 CENPNQ96H22 339 aaPredicted RBP9.58□□□□□ -0.88
TRAF4-209ENST00000473421 WFDC10AQ9H1F0 79 aa9.58□□□□□ -0.88
TRAF4-209ENST00000473421 A0A1W2PPK0 400 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 RBMY1BA6NDE4 496 aaKnown RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 RBMY1EA6NEQ0 496 aaKnown RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 EI24O14681 340 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 BAG2O95816 211 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 FADS2O95864 444 aaKnown RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 TRGV3P03979 118 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 MAS1P04201 325 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 CSN3P07498 182 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 RBMY1DP0C7P1 496 aaKnown RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 ETV1P50549 477 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 RPS11P62280 158 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 DYRK1AQ13627 763 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 C6orf183Q5T699 404 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 GLIPR1L1Q6UWM5 242 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 OR5T1Q8NG75 326 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 MRPS24Q96EL2 167 aaKnown RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 CPNE2Q96FN4 548 aaPredicted RBP9.57□□□□□ -0.88
TRAF4-209ENST00000473421 ABHD14BQ96IU4 210 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 ELOVL1Q9BW60 279 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 CST11Q9H112 138 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 TUBA4BQ9H853 241 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 PLEKHA3Q9HB20 300 aa9.57□□□□□ -0.88
TRAF4-209ENST00000473421 RRP15Q9Y3B9 282 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms