RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF137PP52743 207 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 GNG2P59768 71 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 ZNF816Q0VGE8 651 aaPredicted RBP11.43□□□□□ -0.58
BRCA1-211ENST00000472490 CTF1Q16619 201 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 PNLIPRP3Q17RR3 467 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 CT45A1Q5HYN5 189 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 UBE2NLQ5JXB2 153 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 OLFML2AQ68BL7 652 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 THNSL2Q86YJ6 484 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 ZNF439Q8NDP4 499 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 OR4C13Q8NGP0 309 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 OR5H6Q8NGV6 325 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 CT45A3Q8NHU0 189 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 EDARADDQ8WWZ3 215 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 CYYR1Q96J86 154 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 ABCG5Q9H222 651 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 DCSTAMPQ9H295 470 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 SLC23A1Q9UHI7 598 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 SCOCQ9UIL1 159 aa11.43□□□□□ -0.58
BRCA1-211ENST00000472490 FBN1P35555 2871 aaKnown RBP11.43□□□□□ -0.58
BRCA1-211ENST00000472490 FABP7O15540 132 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 NOL3O60936 208 aaKnown RBP11.42□□□□□ -0.58
BRCA1-211ENST00000472490 SCTP09683 121 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 CEACAM6P40199 344 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 ZNF134P52741 427 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 GNMTQ14749 295 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 Q6ZS49 121 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 TGIF2LXQ8IUE1 241 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 LYG1Q8N1E2 194 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 SLC25A38Q96DW6 304 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 CMTM3Q96MX0 182 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 BCL7BQ9BQE9 202 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 PIPOXQ9P0Z9 390 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 DSCAML1Q8TD84 2053 aa11.42□□□□□ -0.58
BRCA1-211ENST00000472490 IGHV1-3A0A0C4DH29 117 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 A0A1W2PPI3 338 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 CLPSL1A2RUU4 121 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 M0QZK8 103 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 ITGB1BP1O14713 200 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 TIMM23O14925 209 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 MDKP21741 143 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-211ENST00000472490 SOX6P35712 828 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 RELBQ01201 579 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 ZNF260Q3ZCT1 412 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 C11orf88Q6PI97 169 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 Q6ZPA2 131 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 TMEM219Q86XT9 240 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 SAMD12Q8N8I0 201 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 OR56B4Q8NH76 319 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 OR10J5Q8NHC4 309 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 OR2T6Q8NHC8 308 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 RTN4IP1Q8WWV3 396 aaPredicted RBP11.41□□□□□ -0.58
BRCA1-211ENST00000472490 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
BRCA1-211ENST00000472490 NAA50Q9GZZ1 169 aaKnown RBP11.41□□□□□ -0.58
BRCA1-211ENST00000472490 TRAV18A0A075B6X5 111 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 TMEM235A6NFC5 223 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 RAB29O14966 203 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 SLC31A2O15432 143 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 XRCC3O43542 346 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 LANCL1O43813 399 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 CTXN2P0C2S0 81 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 TMBIM6P55061 237 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 HES1Q14469 280 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 HABP2Q14520 560 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-211ENST00000472490 FAM53AQ6NSI3 398 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-211ENST00000472490 FAM71F2Q6NXP2 309 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 CCBE1Q6UXH8 406 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-211ENST00000472490 Q6ZSV7 163 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 MOB3BQ86TA1 216 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 CLVS1Q8IUQ0 354 aaPredicted RBP11.4□□□□□ -0.58
BRCA1-211ENST00000472490 DRAM1Q8N682 238 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 LINC01006Q8NI28 216 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 RBM14Q96PK6 669 aaKnown RBP11.4□□□□□ -0.58
BRCA1-211ENST00000472490 S1PR3Q99500 378 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 ST6GALNAC5Q9BVH7 336 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 PRSS22Q9GZN4 317 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 COMMD3Q9UBI1 195 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 RNF114Q9Y508 228 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 ATRQ13535 2644 aa11.4□□□□□ -0.58
BRCA1-211ENST00000472490 FAM90A9PA6NNJ1 464 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 CHST1O43916 411 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 OR2F2O95006 317 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 SNRNP70P08621 437 aaKnown RBP11.39□□□□□ -0.59
BRCA1-211ENST00000472490 ZNF182P17025 639 aaPredicted RBP11.39□□□□□ -0.59
BRCA1-211ENST00000472490 CD24P25063 80 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 CD1BP29016 333 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 REG1BP48304 166 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 DIAPH2-AS1Q14236 149 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 TMEM69Q5SWH9 247 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 SHISA2Q6UWI4 295 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 GINS4Q9BRT9 223 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 SLC25A33Q9BSK2 321 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 CABLES2Q9BTV7 478 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 OR1A1Q9P1Q5 309 aa11.39□□□□□ -0.59
BRCA1-211ENST00000472490 ZNF230Q9UIE0 474 aaPredicted RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms