RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 GALMQ96C23 342 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 GFI1Q99684 422 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 RASL11BQ9BPW5 248 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 HSPB9Q9BQS6 159 aa7.1□□□□□ -1.27
USF1-204ENST00000472217 MRPL20Q9BYC9 149 aaKnown RBP7.1□□□□□ -1.27
USF1-204ENST00000472217 SLC17A2O00624 439 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 YPEL1O60688 119 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 RGS11O94810 467 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 DUS4LO95620 317 aaKnown RBP7.09□□□□□ -1.27
USF1-204ENST00000472217 NAPSAO96009 420 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 RPLP1P05386 114 aaKnown RBP7.09□□□□□ -1.27
USF1-204ENST00000472217 CRHBPP24387 322 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 BLVRBP30043 206 aaPredicted RBP7.09□□□□□ -1.27
USF1-204ENST00000472217 SOX6P35712 828 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 MAP2K4P45985 399 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 MLLT11Q13015 90 aaPredicted RBP7.09□□□□□ -1.27
USF1-204ENST00000472217 P2RY14Q15391 338 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 MMDQ15546 238 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 LY6G6FQ5SQ64 297 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 ZNF880Q6PDB4 577 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 TEX38Q6PEX7 206 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 LCNL1Q6ZST4 164 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 PRSS48Q7RTY5 328 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 ZNF695Q8IW36 515 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 KLHL30-AS1Q8NEE0 82 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 IL1F10Q8WWZ1 152 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 YPEL2Q96QA6 119 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 NABP2Q9BQ15 211 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 GON7Q9BXV9 100 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 CCDC90BQ9GZT6 254 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 LPAR5Q9H1C0 372 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 PLGRKTQ9HBL7 147 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 ISYNA1Q9NPH2 558 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 ZFP57Q9NU63 452 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 ABRACLQ9P1F3 81 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 AK6Q9Y3D8 172 aaKnown RBP7.09□□□□□ -1.27
USF1-204ENST00000472217 LRRC42Q9Y546 428 aa7.09□□□□□ -1.27
USF1-204ENST00000472217 PRKDCP78527 4128 aaKnown RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 SAA2-SAA4A0A096LPE2 208 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 FOXI3A8MTJ6 420 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 SOCS1O15524 211 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 RRP9O43818 475 aaKnown RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 ARL6IP5O75915 188 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 SAA2P0DJI9 122 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 SLC2A2P11168 524 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 ARSBP15848 533 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 CPEP16870 476 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 PSMA1P25786 263 aaKnown RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 CNTFRP26992 372 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 SLC6A1P30531 599 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 HOXD3P31249 432 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 OR3A3P47888 321 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 FABP5Q01469 135 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 CFHR3Q02985 330 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 FOXE3Q13461 319 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 TRAM1Q15629 374 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 PNLIPRP3Q17RR3 467 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 IZUMO2Q6UXV1 221 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 ZNF833PQ6ZTB9 187 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 MOB1BQ7L9L4 216 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 FAM89BQ8N5H3 189 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 OR2AK2Q8NG84 335 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 SETD6Q8TBK2 473 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 RITA1Q96K30 269 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 P2RX4Q99571 388 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 MGLLQ99685 303 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 HDHD3Q9BSH5 251 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 URM1Q9BTM9 101 aaKnown RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 PARP12Q9H0J9 701 aaKnown RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 IFI27L2Q9H2X8 130 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 VCX3BQ9H321 246 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 CHMP1AQ9HD42 196 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 PLEKHJ1Q9NW61 149 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 STEAP1Q9UHE8 339 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 ZNF107Q9UII5 783 aaPredicted RBP7.08□□□□□ -1.28
USF1-204ENST00000472217 AK3Q9UIJ7 227 aa7.08□□□□□ -1.28
USF1-204ENST00000472217 TRBV6-6A0A0A6YYG2 114 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 K7EIL1 84 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 ST8SIA5O15466 376 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 IGHG4P01861 327 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 IGF1P05019 195 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 ELANEP08246 267 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 VDAC1P21796 283 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 CALRP27797 417 aaKnown RBP7.07□□□□□ -1.28
USF1-204ENST00000472217 MYCNOSP40205 109 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 TMEM50BP56557 158 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 CLDN12P56749 244 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 ACTBP60709 375 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 EGFEM1PQ0D2K5 195 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 TBCEQ15813 527 aaPredicted RBP7.07□□□□□ -1.28
USF1-204ENST00000472217 RAB11BQ15907 218 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 DEFB136Q30KP8 78 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 CXorf66Q5JRM2 361 aaPredicted RBP7.07□□□□□ -1.28
USF1-204ENST00000472217 RNF152Q8N8N0 203 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 RAX2Q96IS3 184 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 CNBD2Q96M20 576 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 DUX3Q96PT4 197 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 ZNF251Q9BRH9 671 aa7.07□□□□□ -1.28
USF1-204ENST00000472217 RIMS4Q9H426 269 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms