RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 RPS27AP62979 156 aaKnown RBP17.65■□□□□ 0.42
C9orf3-213ENST00000471978 RBM48Q5RL73 367 aaKnown RBP17.65■□□□□ 0.42
C9orf3-213ENST00000471978 VAX1Q5SQQ9 334 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 C1orf100Q5SVJ3 147 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 ODF3L1Q8IXM7 274 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 KCTD7Q96MP8 289 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 YPEL2Q96QA6 119 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 FAAP24Q9BTP7 215 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 MRPL20Q9BYC9 149 aaKnown RBP17.65■□□□□ 0.42
C9orf3-213ENST00000471978 ZMAT5Q9UDW3 170 aaKnown RBP17.65■□□□□ 0.42
C9orf3-213ENST00000471978 LRRC42Q9Y546 428 aa17.65■□□□□ 0.42
C9orf3-213ENST00000471978 C6orf201Q7Z4U5 140 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 CEACAM19Q7Z692 300 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 RITA1Q96K30 269 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 NABP2Q9BQ15 211 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 TMEM59Q9BXS4 323 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 ABRACLQ9P1F3 81 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 ZNF580Q9UK33 172 aa17.64■□□□□ 0.41
C9orf3-213ENST00000471978 OR5H8P0DN80 308 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 SRMP19623 302 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 HTR2CP28335 458 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 OR3A3P47888 321 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 ACTBP60709 375 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 DGCR2P98153 550 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 CD69Q07108 199 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 SPHARQ15513 63 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 HMGN3Q15651 99 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 HSD17B12Q53GQ0 312 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 LY6G6FQ5SQ64 297 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 ZNF833PQ6ZTB9 187 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 OR2AK2Q8NG84 335 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 OR5M8Q8NGP6 311 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 KCNG3Q8TAE7 436 aa17.63■□□□□ 0.41
C9orf3-213ENST00000471978 LSM2Q9Y333 95 aaKnown RBP17.63■□□□□ 0.41
C9orf3-213ENST00000471978 CNTFRP26992 372 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 PSMB8P28062 276 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 MED22Q15528 200 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 C11orf87Q6NUJ2 197 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 IL1F10Q8WWZ1 152 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 ZNF251Q9BRH9 671 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 CHCHD6Q9BRQ6 235 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 NICN1Q9BSH3 213 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 TM2D1Q9BX74 207 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 KCNK15Q9H427 330 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 CHMP1AQ9HD42 196 aaPredicted RBP17.62■□□□□ 0.41
C9orf3-213ENST00000471978 SCN3BQ9NY72 215 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 STEAP1Q9UHE8 339 aa17.62■□□□□ 0.41
C9orf3-213ENST00000471978 TENM3Q9P273 2699 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 NBEAL2Q6ZNJ1 2754 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 SAA2-SAA4A0A096LPE2 208 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 SLC22A1O15245 554 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 SAA2P0DJI9 122 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-213ENST00000471978 LUMP51884 338 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-213ENST00000471978 UNC119Q13432 240 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 C4orf3Q8WVX3 66 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 WSB1Q9Y6I7 421 aa17.61■□□□□ 0.41
C9orf3-213ENST00000471978 NBR2O15453 112 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 HLA-DRB1P01911 266 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 BLVRBP30043 206 aaPredicted RBP17.6■□□□□ 0.41
C9orf3-213ENST00000471978 DCTN2Q13561 401 aaKnown RBP17.6■□□□□ 0.41
C9orf3-213ENST00000471978 SVOPQ8N4V2 548 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 SETD6Q8TBK2 473 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 B9D2Q9BPU9 175 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 ANKRD60Q9BZ19 345 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 IFI27L2Q9H2X8 130 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 OR51J1Q9H342 316 aa17.6■□□□□ 0.41
C9orf3-213ENST00000471978 TMEM14DPA8MWL7 114 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 ANKRD65E5RJM6 399 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 G3V318 75 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 ST8SIA5O15466 376 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 RAMP3O60896 148 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 BPNT1O95861 308 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 NAPSAO96009 420 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 UCHL1P09936 223 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 CD37P11049 281 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 QRFPP83859 136 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 C5orf64Q2M2E5 130 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 C9orf66Q5T8R8 295 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 LIPKQ5VXJ0 399 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 TMEM65Q6PI78 240 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 OR6M1Q8NGM8 313 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 UFD1Q92890 307 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 TMEM203Q969S6 136 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 PARP11Q9NR21 331 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 PLEKHJ1Q9NW61 149 aa17.59■□□□□ 0.41
C9orf3-213ENST00000471978 A0A0A6YYD4 124 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 IGHV7-81A0A0B4J1V7 117 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 ATP6V0E1O15342 81 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 PPIFP30405 207 aaKnown RBP17.58■□□□□ 0.4
C9orf3-213ENST00000471978 IRF3Q14653 427 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 LIN54Q6MZP7 749 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 ZNF880Q6PDB4 577 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 NPBQ8NG41 125 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 OR11H1Q8NG94 326 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 MYOZ3Q8TDC0 251 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 KLK15Q9H2R5 256 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 PIPOXQ9P0Z9 390 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 KIAA1456Q9P272 454 aa17.58■□□□□ 0.4
C9orf3-213ENST00000471978 SEC14L6B5MCN3 397 aa17.57■□□□□ 0.4
C9orf3-213ENST00000471978 FHL3Q13643 280 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms