RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 PPIFP30405 207 aaKnown RBP6.28□□□□□ -1.4
USP48-207ENST00000471752 ZNF137PP52743 207 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 TMEM50BP56557 158 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 ACTBP60709 375 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 KIR2DS1Q14954 304 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 P2RY14Q15391 338 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 TEX38Q6PEX7 206 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 LINC00596Q86U02 117 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 TMEM203Q969S6 136 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 ABHD14BQ96IU4 210 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 RASL11BQ9BPW5 248 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 PCDHB16Q9NRJ7 776 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 ZFP57Q9NU63 452 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 PLCXD1Q9NUJ7 323 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 MBNL3Q9NUK0 354 aaKnown RBP6.28□□□□□ -1.4
USP48-207ENST00000471752 LIN7CQ9NUP9 197 aaKnown RBP6.28□□□□□ -1.4
USP48-207ENST00000471752 GAR1Q9NY12 217 aaKnown RBP6.28□□□□□ -1.4
USP48-207ENST00000471752 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.28□□□□□ -1.4
USP48-207ENST00000471752 OR1A1Q9P1Q5 309 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 RNF150Q9ULK6 438 aa6.28□□□□□ -1.4
USP48-207ENST00000471752 SAA2-SAA4A0A096LPE2 208 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 IGKV1-6A0A0C4DH72 117 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 I3L521 148 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 ATP6V0E1O15342 81 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 LANCL1O43813 399 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 ZNF780AO75290 641 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 PDCD6O75340 191 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 IGHG4P01861 327 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CDK1P06493 297 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CD3GP09693 182 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 SAA2P0DJI9 122 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 CD37P11049 281 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 SOX6P35712 828 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 MAP2K4P45985 399 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CDX1P47902 265 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 WNT4P56705 351 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CLDN12P56749 244 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 RPS25P62851 125 aaKnown RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 RPS27AP62979 156 aaKnown RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 SLC35B1P78383 322 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 GABPB1Q06547 395 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 FOXE3Q13461 319 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 IRF3Q14653 427 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 C1orf100Q5SVJ3 147 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CEACAM19Q7Z692 300 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 FOXRED2Q8IWF2 684 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 C8orf59Q8N0T1 100 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 STX19Q8N4C7 294 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 PACRGLQ8N7B6 248 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 ZNF491Q8N8L2 437 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 DRAXINQ8NBI3 349 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 OR11H1Q8NG94 326 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 MYOZ3Q8TDC0 251 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CPNE2Q96FN4 548 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 CLCC1Q96S66 551 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 MYCBPQ99417 103 aaPredicted RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 B9D2Q9BPU9 175 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 IFI27L2Q9H2X8 130 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 FBXL15Q9H469 300 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
USP48-207ENST00000471752 CKLFQ9UBR5 152 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 A3GALT2U3KPV4 340 aa6.27□□□□□ -1.41
USP48-207ENST00000471752 SHISA3A0PJX4 238 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 FOXI3A8MTJ6 420 aaPredicted RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 TMEM14DPA8MWL7 114 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 CASQ2O14958 399 aaPredicted RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 NAPSAO96009 420 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 IGF1P05019 195 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 CD1AP06126 327 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 SCTP09683 121 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 SRMP19623 302 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 ECI1P42126 302 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 DGCR2P98153 550 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 CD69Q07108 199 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 FHL3Q13643 280 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 MMDQ15546 238 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 HMGN3Q15651 99 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 C5orf64Q2M2E5 130 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 ZNF260Q3ZCT1 412 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 C19orf54Q5BKX5 351 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 CXorf66Q5JRM2 361 aaPredicted RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 C6orf183Q5T699 404 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 LIPKQ5VXJ0 399 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 ZNF880Q6PDB4 577 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 FAM131AQ6UXB0 335 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 ZNF833PQ6ZTB9 187 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 HAPLN4Q86UW8 402 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 C10orf67Q8IYJ2 551 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 MINDY2Q8NBR6 621 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 OR1N2Q8NGR9 330 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 IL1F10Q8WWZ1 152 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 C5orf30Q96GV9 206 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 AGMATQ9BSE5 352 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 FAM103A1Q9BTL3 118 aaKnown RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 ABHD14AQ9BUJ0 271 aa6.26□□□□□ -1.41
USP48-207ENST00000471752 C11orf54Q9H0W9 315 aaPredicted RBP6.26□□□□□ -1.41
USP48-207ENST00000471752 LPAR5Q9H1C0 372 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms