RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 ZW10O43264 779 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 CDK14O94921 469 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 CRPP02741 224 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 FBP1P09467 338 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 CCL3P10147 92 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 SERPINB10P48595 397 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 SPAG1Q07617 926 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 MAPK14Q16539 360 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 SLC35E3Q7Z769 313 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 LHFPL1Q86WI0 220 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 OR4A15Q8NGL6 344 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 OR11L1Q8NGX0 322 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 COPS4Q9BT78 406 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 SNX12Q9UMY4 172 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 FIS1Q9Y3D6 152 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 FAM215AQ9Y5M1 114 aa0.07□□□□□ -2.4
PRPF40A-207ENST00000471701 OR5K4A6NMS3 321 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 BOLA2-SMG1P6H3BVE0 249 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 RFXANKO14593 260 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 SC5DO75845 299 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 GIMD1P0DJR0 217 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 DSTNP60981 165 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 TMEM258P61165 79 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 SLC36A2Q495M3 483 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 PABPC1L2AQ5JQF8 200 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 HBMQ6B0K9 141 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 FAHD1Q6P587 224 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 LINC00523Q86TU6 105 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 ZBTB8OSQ8IWT0 167 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 OR6K2Q8NGY2 324 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 OR5J2Q8NH18 312 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 PGLYRP3Q96LB9 341 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 MIEN1Q9BRT3 115 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 ADAT1Q9BUB4 502 aaKnown RBP0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 SYT4Q9H2B2 425 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 C8orf4Q9NR00 106 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 ALG5Q9Y673 324 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 FREM1Q5H8C1 2179 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 DSCAML1Q8TD84 2053 aa0.06□□□□□ -2.4
PRPF40A-207ENST00000471701 CUL9Q8IWT3 2517 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 BPGMP07738 259 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 AKR1C3P42330 323 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 ATP5J2P56134 94 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 GLO1Q04760 184 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 HSP90B2PQ58FF3 399 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 Q8N2B8 174 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 FNDC9Q8TBE3 224 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 CIB1Q99828 191 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 GTSF1LQ9H1H1 148 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 METTL17Q9H7H0 456 aaPredicted RBP0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 HHLA3Q9XRX5 114 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 FAT4Q6V0I7 4981 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 BAZ2BQ9UIF8 2168 aaKnown RBP0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 RAB3GAP2Q9H2M9 1393 aa0.05□□□□□ -2.4
PRPF40A-207ENST00000471701 A0A1W2PPV4 95 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 GRIFINA4D1Z8 144 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 LINC00862A6NCI5 91 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 F8W036 122 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 PHYHO14832 338 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 POLR3GO15318 223 aaPredicted RBP0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 SHOX2O60902 331 aaPredicted RBP0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 MBP02144 154 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 ORM2P19652 201 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 NPPCP23582 126 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 CRYBB3P26998 211 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 XCL1P47992 114 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 SULT1A2P50226 295 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 TRAM1Q15629 374 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 TRIP13Q15645 432 aaPredicted RBP0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 LGALS9BQ3B8N2 356 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 TMEM42Q69YG0 159 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 DTD1Q8TEA8 209 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 MED18Q9BUE0 208 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 MED9Q9NWA0 146 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 TTC41PQ6P2S7 1318 aa0.04□□□□□ -2.4
PRPF40A-207ENST00000471701 PTPRBP23467 1997 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 TRGV5A0A0B4J1U4 118 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 OR11H12B2RN74 326 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 H3BSA7 217 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 UBDO15205 165 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 CIAO1O76071 339 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 DNASE1L1P49184 302 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 ACTBP60709 375 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 FGF12P61328 243 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 ACTG1P63261 375 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 KIAA2026Q5HYC2 2103 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 TMEM31Q5JXX7 168 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 C6orf183Q5T699 404 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 HENMT1Q5T8I9 393 aaKnown RBP0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 FAM43BQ6ZT52 329 aaPredicted RBP0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 Q6ZT83 130 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 DOLPP1Q86YN1 238 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 CNEP1R1Q8N9A8 125 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 OR11H2Q8NH07 326 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 AGR3Q8TD06 166 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 OR51E2Q9H255 320 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 STMN3Q9NZ72 180 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 MAST4O15021 2626 aa0.03□□□□□ -2.4
PRPF40A-207ENST00000471701 DSCAMO60469 2012 aa0.03□□□□□ -2.41
PRPF40A-207ENST00000471701 HEATR5BQ9P2D3 2071 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms