RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CT45A1Q5HYN5 189 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 ABHD12Q8N2K0 398 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 PNKDQ8N490 385 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 ARRDC1Q8N5I2 433 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 ZNF439Q8NDP4 499 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 CT45A3Q8NHU0 189 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 C7orf50Q9BRJ6 194 aaKnown RBP15.67■□□□□ 0.1
PSPC1-203ENST00000471658 PALMDQ9NP74 551 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 RNF150Q9ULK6 438 aa15.67■□□□□ 0.1
PSPC1-203ENST00000471658 FLNAP21333 2647 aaKnown RBP15.67■□□□□ 0.1
PSPC1-203ENST00000471658 A0A1W2PRD5 423 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 A0A1W2PRF3 423 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 A0A1W2PRM7 423 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 CENPXA8MT69 81 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 RNASEK-C17orf49H0YIS7 233 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 ST8SIA5O15466 376 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 PPYP01298 95 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 KRTAP1-1Q07627 177 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 AADACL3Q5VUY0 350 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 LHFPL1Q86WI0 220 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 OR13C8Q8NGS7 320 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 DEDD2Q8WXF8 326 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 LHX4Q969G2 390 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 OR2W1Q9Y3N9 320 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 AUP1Q9Y679 476 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 CREBBPQ92793 2442 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 CELSR1Q9NYQ6 3014 aa15.66■□□□□ 0.1
PSPC1-203ENST00000471658 A0A087X0M5 115 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 IGHV2-26A0A0B4J1V2 119 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 A0A1B0GX30 115 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 NAP1L6A6NFF2 107 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 OR8U9P0C7N5 309 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 HOXB4P17483 251 aaPredicted RBP15.65■□□□□ 0.1
PSPC1-203ENST00000471658 TMEM30BQ3MIR4 351 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 IDO2Q6ZQW0 420 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 TMEM17Q86X19 198 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 OR8U1Q8NH10 309 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 TERB2Q8NHR7 220 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 TOMM40LQ969M1 308 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 FXYD6Q9H0Q3 95 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 UNKLQ9H9P5 680 aaKnown RBP15.65■□□□□ 0.1
PSPC1-203ENST00000471658 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.65■□□□□ 0.12e-23■■■■■ 173.4
PSPC1-203ENST00000471658 TEX15Q9BXT5 2789 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 C1orf229Q6ZS94 237 aaPredicted RBP15.65■□□□□ 0.1
PSPC1-203ENST00000471658 MOB3AQ96BX8 217 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 ABHD14BQ96IU4 210 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 SLC2A8Q9NY64 477 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 SCP2D1Q9UJQ7 156 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 SVEP1Q4LDE5 3571 aa15.65■□□□□ 0.1
PSPC1-203ENST00000471658 IGHV3OR16-10A0A075B7F0 116 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 J3QR06 171 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 RGS11O94810 467 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 SPNP16150 400 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 CD34P28906 385 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 DEFA1P59665 94 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 DEFA3P59666 94 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 BAMBIQ13145 260 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 MZT2BQ6NZ67 158 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 NRARPQ7Z6K4 114 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 OR2AK2Q8NG84 335 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 MARCH1Q8TCQ1 289 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 SECTM1Q8WVN6 248 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 PRRT1Q99946 306 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 SMR3AQ99954 134 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 AGMATQ9BSE5 352 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 HEXA-AS1Q9H8Q6 139 aa15.64■□□□□ 0.09
PSPC1-203ENST00000471658 RBM7Q9Y580 266 aaKnown RBP15.64■□□□□ 0.09
PSPC1-203ENST00000471658 ABCA1O95477 2261 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 GATA3P23771 443 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 LUMP51884 338 aaPredicted RBP15.63■□□□□ 0.09
PSPC1-203ENST00000471658 HERV-K104P61576 105 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 SPNS3Q6ZMD2 512 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 SLC25A48Q6ZT89 311 aaKnown RBP15.63■□□□□ 0.09
PSPC1-203ENST00000471658 OR13D1Q8NGV5 346 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 OR9G1Q8NH87 305 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 ZFAND2BQ8WV99 257 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 C18orf12Q96KH6 178 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 ABHD14AQ9BUJ0 271 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 CLEC7AQ9BXN2 247 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 IFI27L2Q9H2X8 130 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 OCEL1Q9H607 264 aa15.63■□□□□ 0.09
PSPC1-203ENST00000471658 FAM240BA0A1B0GVZ2 78 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 PI3P19957 117 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 SLC6A1P30531 599 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 PLA1AQ53H76 456 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 LY6G6FQ5SQ64 297 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 C5orf30Q96GV9 206 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 SLC5A7Q9GZV3 580 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 CCL28Q9NRJ3 127 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 FLVCR2Q9UPI3 526 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 ACANP16112 2415 aa15.62■□□□□ 0.09
PSPC1-203ENST00000471658 CENPVL3A0A0U1RRI6 287 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 TOR1AO14656 332 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 HSD17B6O14756 317 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 IGLV1-47P01700 117 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 LDLRAD2Q5SZI1 272 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 OR11H6Q8NGC7 330 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 EDARADDQ8WWZ3 215 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 UPRTQ96BW1 309 aa15.61■□□□□ 0.09
PSPC1-203ENST00000471658 OR2D2Q9H210 308 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms