RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
SF3A1-206ENST00000471037 BAK1Q16611 211 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 RNASE12Q5GAN4 147 aaKnown RBP7.33□□□□□ -1.24
SF3A1-206ENST00000471037 KRBOX4Q5JUW0 171 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 RSBN1Q5VWQ0 802 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-206ENST00000471037 Q6ZS49 121 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 GDPD3Q7L5L3 318 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 HOGA1Q86XE5 327 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 C11orf44Q8N8P7 122 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 PLPPR1Q8TBJ4 325 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 MRPL30Q8TCC3 161 aaKnown RBP7.33□□□□□ -1.24
SF3A1-206ENST00000471037 MRAPQ8TCY5 172 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 C17orf50Q8WW18 174 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 COQ2Q96H96 371 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 HDHD3Q9BSH5 251 aaPredicted RBP7.33□□□□□ -1.24
SF3A1-206ENST00000471037 NPFFR1Q9GZQ6 430 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 KLK11Q9UBX7 282 aa7.33□□□□□ -1.24
SF3A1-206ENST00000471037 MEIKINA0A087WXM9 373 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ODAMA1E959 279 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 MEIS3P1A6NDR6 274 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 LANCL1O43813 399 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ORC5O43913 435 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 CHST1O43916 411 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 NDUFB7P17568 137 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 NAT1P18440 290 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TBPP20226 339 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 LOXL3P58215 753 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TAS2R46P59540 309 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TAS2R19P59542 299 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 MEF2CQ06413 473 aaPredicted RBP7.32□□□□□ -1.24
SF3A1-206ENST00000471037 AESQ08117 197 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 EDDM3AQ14507 147 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 KIR2DS1Q14954 304 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 LY6EQ16553 131 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ACTBL2Q562R1 376 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF880Q6PDB4 577 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TRAT1Q6PIZ9 186 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF554Q86TJ5 538 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TOMM5Q8N4H5 51 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TMEM229BQ8NBD8 167 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 CYYR1Q96J86 154 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF286AQ9HBT8 521 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 Q9N2K0 584 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 ABCB10Q9NRK6 738 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 MBNL3Q9NUK0 354 aaKnown RBP7.32□□□□□ -1.24
SF3A1-206ENST00000471037 NECAP2Q9NVZ3 263 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 OR6C3Q9NZP0 311 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 KIF25Q9UIL4 384 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 TRAPPC2LQ9UL33 140 aa7.32□□□□□ -1.24
SF3A1-206ENST00000471037 KMT2CQ8NEZ4 4911 aaKnown RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 hADV38S2A0JD32 116 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ANKRD20A5PA0PJZ0 165 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 VGLL3A8MV65 326 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF736B4DX44 427 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 FBXO24O75426 580 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 AKAIN1P0CW23 69 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 VSIG10L2P0DP72 767 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 FAUP35544 74 aaKnown RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 GLIPR1P48060 266 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 EDDM3BP56851 147 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 DEFA1P59665 94 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 DEFA3P59666 94 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 HLA-DRB3P79483 266 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 DYRK1AQ13627 763 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 KLF9Q13886 244 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 C6orf183Q5T699 404 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 STEAP3Q658P3 488 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF57Q68EA5 555 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 LYSMD2Q8IV50 215 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 Q8N2B8 174 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 GVQW1Q8N7I0 195 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 BEST4Q8NFU0 473 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 OR4K15Q8NH41 348 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 SETD6Q8TBK2 473 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 PIFOQ8TCI5 191 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 WIPF2Q8TF74 440 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 SNAPC3Q92966 411 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 C7orf50Q9BRJ6 194 aaKnown RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ST6GALNAC5Q9BVH7 336 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF702PQ9H963 129 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 RAB9BQ9NP90 201 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 SERTAD4Q9NUC0 356 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 AURKAIP1Q9NWT8 199 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 KCNIP1Q9NZI2 227 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ZNF230Q9UIE0 474 aaPredicted RBP7.31□□□□□ -1.24
SF3A1-206ENST00000471037 ANXA10Q9UJ72 324 aa7.31□□□□□ -1.24
SF3A1-206ENST00000471037 DNAH3Q8TD57 4116 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 TRGV10A0A0A0MS01 117 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 A0A1W2PPH5 198 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 ADARB2-AS1A8MUL3 147 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 TRDCB7Z8K6 153 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 DIRAS3O95661 229 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 CD74P04233 296 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 CTXN2P0C2S0 81 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 RCC1P18754 421 aaPredicted RBP7.3□□□□□ -1.24
SF3A1-206ENST00000471037 GZMHP20718 246 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 GLP1RP43220 463 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 ARPC4P59998 168 aa7.3□□□□□ -1.24
SF3A1-206ENST00000471037 RPL31P62899 125 aaKnown RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms