RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PSG11Q9UQ72 335 aa8.04□□□□□ -1.12
CCM2-204ENST00000470837 VSIG4Q9Y279 399 aa8.04□□□□□ -1.12
CCM2-204ENST00000470837 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
CCM2-204ENST00000470837 DOPEY2Q9Y3R5 2298 aa8.04□□□□□ -1.12
CCM2-204ENST00000470837 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
CCM2-204ENST00000470837 PIGBOS1A0A0B4J2F0 54 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 IGHV2-70DA0A0C4DH43 119 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 C17orf98A8MV24 154 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 B4DSR2 109 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 C22orf46C9J442 243 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 ITGB1BP1O14713 200 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 HLA-AP01891 365 aaKnown RBP8.03□□□□□ -1.12
CCM2-204ENST00000470837 IL5P05113 134 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 OR4E1P0C645 316 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 IGHV1-8P0DP01 117 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 PI3P19957 117 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 GNG10P50151 68 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 LOXL3P58215 753 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 ARF6P62330 175 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 LY6G6FQ5SQ64 297 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 GLDNQ6ZMI3 551 aaPredicted RBP8.03□□□□□ -1.12
CCM2-204ENST00000470837 TCF23Q7RTU1 214 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 SLC25A42Q86VD7 318 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 ZNF645Q8N7E2 425 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 LY6G5BQ8NDX9 201 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 COQ8AQ8NI60 647 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 RTN4IP1Q8WWV3 396 aaPredicted RBP8.03□□□□□ -1.12
CCM2-204ENST00000470837 S1PR3Q99500 378 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 RSRP1Q9BUV0 290 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 TOLLIPQ9H0E2 274 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 FXYD6Q9H0Q3 95 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 OR2D2Q9H210 308 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 LPAR2Q9HBW0 351 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 PIPOXQ9P0Z9 390 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 KPTNQ9Y664 436 aa8.03□□□□□ -1.12
CCM2-204ENST00000470837 AKAP6Q13023 2319 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 SNRPGP15A8MWD9 76 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 RAB29O14966 203 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 ST8SIA5O15466 376 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 FCN3O75636 299 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 B3GALNT1O75752 331 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 IFNA2P01563 188 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 IGHV3-7P01780 117 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 ZFP36P26651 326 aaKnown RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 GNRHRP30968 328 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 MECP2P51608 486 aaKnown RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 DVL1P1P54792 670 aaPredicted RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 CATR1Q13166 79 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 MSMO1Q15800 293 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 NCR3LG1Q68D85 454 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 C1orf122Q6ZSJ8 110 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 LYG1Q8N1E2 194 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 ABHD12Q8N2K0 398 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 UXS1Q8NBZ7 420 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 OR9G1Q8NH87 305 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 ZNF596Q8TC21 504 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 ZNF431Q8TF32 576 aaPredicted RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 CASTOR1Q8WTX7 329 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 TNFRSF14Q92956 283 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 LEAP2Q969E1 77 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 Q96MF0 132 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 PHB2Q99623 299 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 RTBDNQ9BSG5 229 aaPredicted RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 REG4Q9BYZ8 158 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 MED28Q9H204 178 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 TMEM133Q9H2Q1 129 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 OR51J1Q9H342 316 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 C5orf66Q9H5L9 145 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 CCL28Q9NRJ3 127 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 SLC2A9Q9NRM0 540 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 RNF150Q9ULK6 438 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 AMMECR1Q9Y4X0 333 aaPredicted RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 ALG5Q9Y673 324 aa8.02□□□□□ -1.13
CCM2-204ENST00000470837 GCN1Q92616 2671 aaKnown RBP8.02□□□□□ -1.13
CCM2-204ENST00000470837 DCHS2Q6V1P9 2916 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 IGKV1D-13A0A0B4J2D9 117 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 KIAA1324LA8MWY0 1029 aaPredicted RBP8.01□□□□□ -1.13
CCM2-204ENST00000470837 RNF223E7ERA6 249 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 MPPED1O15442 326 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 TNFSF12O43508 249 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 MMP23AO75900 390 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 TOX4O94842 621 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 SERPINE2P07093 398 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 MSMBP08118 114 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 IGKV1-13P0DP09 117 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 ZNF16P17020 682 aaPredicted RBP8.01□□□□□ -1.13
CCM2-204ENST00000470837 GATA3P23771 443 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 PRTN3P24158 256 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 CD34P28906 385 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 DLX6P56179 175 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 RND3P61587 244 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 SRPXP78539 464 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 LOXL1Q08397 574 aaPredicted RBP8.01□□□□□ -1.13
CCM2-204ENST00000470837 DHRS2Q13268 280 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 PPP1R1AQ13522 171 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 DCAF12L2Q5VW00 463 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 LIN54Q6MZP7 749 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 ZNF818PQ6ZRF7 136 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 LYG2Q86SG7 212 aa8.01□□□□□ -1.13
CCM2-204ENST00000470837 C8orf31Q8N9H6 132 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms