RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 SLC2A2P11168 524 aaPredicted RBP11.25□□□□□ -0.61
TOP3B-215ENST00000470338 CD36P16671 472 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 HES1Q14469 280 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 HNF4GQ14541 408 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 TMEM95Q3KNT9 176 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 MOGAT2Q3SYC2 334 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 ARSJQ5FYB0 599 aaPredicted RBP11.25□□□□□ -0.61
TOP3B-215ENST00000470338 TGIF2LXQ8IUE1 241 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 ODF3L1Q8IXM7 274 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 LYG1Q8N1E2 194 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 Q8N6K4 173 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 OR10R2Q8NGX6 335 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 SETD6Q8TBK2 473 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 RAB3CQ96E17 227 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 EAF1Q96JC9 268 aaPredicted RBP11.25□□□□□ -0.61
TOP3B-215ENST00000470338 KCTD7Q96MP8 289 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
TOP3B-215ENST00000470338 ABHD14AQ9BUJ0 271 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 C12orf4Q9NQ89 552 aa11.25□□□□□ -0.61
TOP3B-215ENST00000470338 A0A087WXM4 84 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 IGHV3-72A0A0B4J1Y9 119 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 SMIM30A4D0T7 59 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 METTL21EPA6NDL7 271 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 PEX14O75381 377 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 TNFAIP8O95379 198 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 GADD45AP24522 165 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 SDC2P34741 201 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 HLA-DRB3P79483 266 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 C2orf68Q2NKX9 166 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 C11orf44Q8N8P7 122 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 OR2T10Q8NGZ9 312 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 IL1F10Q8WWZ1 152 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 MMP27Q9H306 513 aa11.24□□□□□ -0.61
TOP3B-215ENST00000470338 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-215ENST00000470338 ZNF736B4DX44 427 aaPredicted RBP11.23□□□□□ -0.61
TOP3B-215ENST00000470338 MFNGO00587 321 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 ITGB1BP1O14713 200 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 FBXO24O75426 580 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 TSPAN15O95858 294 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 SCTP09683 121 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 CD28P10747 220 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 HIST2H2BDQ6DRA6 164 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 ZNF833PQ6ZTB9 187 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 TSPAN14Q8NG11 270 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 OR2AK2Q8NG84 335 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 RNF167Q9H6Y7 350 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 PLSCR3Q9NRY6 295 aa11.23□□□□□ -0.61
TOP3B-215ENST00000470338 LOC100506127A0A0U1RQW1 187 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 TRIM64CA6NLI5 447 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 TRDCB7Z8K6 153 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 MOSP00540 346 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 CSF1P09603 554 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 CD3GP09693 182 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 HIST1H1DP16402 221 aaKnown RBP11.22□□□□□ -0.61
TOP3B-215ENST00000470338 GNB3P16520 340 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 ZBTB25P24278 435 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 LSAMPQ13449 338 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 SFXN4Q6P4A7 337 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 OR5AU1Q8NGC0 362 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 AGMATQ9BSE5 352 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 CENPOQ9BU64 300 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 ATG5Q9H1Y0 275 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 IFI27L2Q9H2X8 130 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 GHITMQ9H3K2 345 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 SLC23A1Q9UHI7 598 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 DAPK2Q9UIK4 370 aa11.22□□□□□ -0.61
TOP3B-215ENST00000470338 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 SAA2-SAA4A0A096LPE2 208 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 IGKV1-6A0A0C4DH72 117 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 SERPINE3A8MV23 424 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 ST8SIA5O15466 376 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 FCGR3AP08637 254 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 CLEC2LP0C7M8 214 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 SAA2P0DJI9 122 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-215ENST00000470338 CEACAM6P40199 344 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 OR3A3P47888 321 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 MRPS15P82914 257 aaKnown RBP11.21□□□□□ -0.61
TOP3B-215ENST00000470338 CD83Q01151 205 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 MXD1Q05195 221 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 ARL6IP1Q15041 203 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 C9orf152Q5JTZ5 239 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 CENPVQ7Z7K6 275 aaPredicted RBP11.21□□□□□ -0.61
TOP3B-215ENST00000470338 Q8N9W7 124 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 OR8H1Q8NGG4 311 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 YIPF6Q96EC8 236 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 ZNF251Q9BRH9 671 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 TOLLIPQ9H0E2 274 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 PARP12Q9H0J9 701 aaKnown RBP11.21□□□□□ -0.61
TOP3B-215ENST00000470338 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.21□□□□□ -0.61
TOP3B-215ENST00000470338 PIPOXQ9P0Z9 390 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 OR1A1Q9P1Q5 309 aa11.21□□□□□ -0.61
TOP3B-215ENST00000470338 PLXNB1O43157 2135 aa11.21□□□□□ -0.62
TOP3B-215ENST00000470338 A0A075B6Q4 140 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 NCBP2LA6PVI3 153 aaKnown RBP11.2□□□□□ -0.62
TOP3B-215ENST00000470338 ADARB2-AS1A8MUL3 147 aa11.2□□□□□ -0.62
TOP3B-215ENST00000470338 RAB29O14966 203 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 203.5 ms