RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 VGLL3A8MV65 326 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 OOSP1A8MZH6 123 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 LPLP06858 475 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 PRSS3P35030 304 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 PPP1CCP36873 323 aaKnown RBP12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 GNG10P50151 68 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 DYNLT3P51808 116 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 MADCAM1Q13477 382 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 FAM53AQ6NSI3 398 aaPredicted RBP12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 CNIH2Q6PI25 160 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 HOGA1Q86XE5 327 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR52L2PQ8NGH6 319 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR10V1Q8NGI7 309 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 FAM216AQ8WUB2 273 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 MAFIPQ8WZ33 124 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 ABHD14AQ9BUJ0 271 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 SLC23A1Q9UHI7 598 aa12.08□□□□□ -0.48
CDC42SE1-203ENST00000470278 IGKV1D-8A0A087WSZ0 117 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 SULT1C2O00338 296 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 IGHV3-7P01780 117 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 CTXN2P0C2S0 81 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 PTHLHP12272 177 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZNF134P52741 427 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 CT45A1Q5HYN5 189 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 TPTE2P1Q5T6R2 138 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 DTX3Q8N9I9 347 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR2AK2Q8NG84 335 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR10X1Q8NGY0 326 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 CT45A3Q8NHU0 189 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 GPX8Q8TED1 209 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 EDARADDQ8WWZ3 215 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 ST6GALNAC5Q9BVH7 336 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 ESM1Q9NQ30 184 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 BATF3Q9NR55 127 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR1A1Q9P1Q5 309 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 ANXA10Q9UJ72 324 aa12.07□□□□□ -0.48
CDC42SE1-203ENST00000470278 DNAJC9-AS1A6NH13 148 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 SLC31A2O15432 143 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 HSPA12AO43301 675 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 HOXA3O43365 443 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 IL3RAP26951 378 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 IER3P46695 156 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 RAB7AP51149 207 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 ARHGDIBP52566 201 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 MRPS10P82664 201 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 BAMBIQ13145 260 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 SSX2Q16385 188 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 IGSF11Q5DX21 431 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 CCDC144NLQ6NUI1 221 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 SNX29P2Q8IUI4 249 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 DYNAPQ8N1N2 210 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 BEST4Q8NFU0 473 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR5R1Q8NH85 324 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 OR10J5Q8NHC4 309 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZFAND2BQ8WV99 257 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 GCDHQ92947 438 aaPredicted RBP12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 SNAPC3Q92966 411 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 ST6GALNAC6Q969X2 333 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 IFI27L2Q9H2X8 130 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 DPAGT1Q9H3H5 408 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 GHITMQ9H3K2 345 aa12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 MRPS7Q9Y2R9 242 aaKnown RBP12.06□□□□□ -0.48
CDC42SE1-203ENST00000470278 TGP01266 2768 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 A0A1W2PPE3 182 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 BET1O15155 118 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 CTDSPLO15194 276 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 TXNL1O43396 289 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 VENTXO95231 258 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 NAT1P18440 290 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 CEACAM6P40199 344 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 ZNF816Q0VGE8 651 aaPredicted RBP12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 SLC9A3R2Q15599 337 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 LRRC75BQ2VPJ9 315 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 PYHIN1Q6K0P9 492 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 GVQW1Q8N7I0 195 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 TOMM40LQ969M1 308 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 RPEQ96AT9 228 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 DIRAS2Q96HU8 199 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 ABHD1Q96SE0 405 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 IFT46Q9NQC8 304 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 RDH8Q9NYR8 311 aa12.05□□□□□ -0.48
CDC42SE1-203ENST00000470278 A0A1W2PPI3 338 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 HSD17B6O14756 317 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 IGHV4-59P01825 116 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 RNASE1P07998 156 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 TNFSF8P32971 234 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 S100A5P33763 92 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 ARPC4P59998 168 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 UBA52P62987 128 aaKnown RBP12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 HABP2Q14520 560 aaPredicted RBP12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 ODF3L1Q8IXM7 274 aa12.04□□□□□ -0.48
CDC42SE1-203ENST00000470278 H1FOOQ8IZA3 346 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms