RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 OR4C12Q96R67 309 aa1.33□□□□□ -2.2
ITGA6-209ENST00000470259 OR8B2Q96RD0 313 aa1.33□□□□□ -2.2
ITGA6-209ENST00000470259 FMO2Q99518 471 aa1.33□□□□□ -2.2
ITGA6-209ENST00000470259 MRPS30Q9NP92 439 aaKnown RBP1.33□□□□□ -2.2
ITGA6-209ENST00000470259 C8orf17Q9NRJ1 99 aa1.33□□□□□ -2.2
ITGA6-209ENST00000470259 CLN8Q9UBY8 286 aa1.33□□□□□ -2.2
ITGA6-209ENST00000470259 DSTQ03001 7570 aaKnown RBP1.33□□□□□ -2.2
ITGA6-209ENST00000470259 NBDYA0A0U1RRE5 68 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CTAGE15A4D2H0 777 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 PCP4L1A6NKN8 68 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CEACAM18A8MTB9 384 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 BOLA2-SMG1P6H3BVE0 249 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 GOSR2O14653 212 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 OVOL1O14753 267 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CASQ2O14958 399 aaPredicted RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 PPP1R2P9O14990 202 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 MAGEB3O15480 346 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 C1orf105O95561 183 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 RPN2P04844 631 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CD3GP09693 182 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CECR9P0C854 216 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CTRB1P17538 263 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 HSPA9P38646 679 aaKnown RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 ATP5OP48047 213 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CDKN2DP55273 166 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 DSCR4P56555 118 aaPredicted RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CARD18P57730 90 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 YWHAEP62258 255 aaKnown RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 ARF6P62330 175 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CDK5Q00535 292 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 TMED1Q13445 227 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 TGFBIQ15582 683 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 LRRC23Q53EV4 343 aaPredicted RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 ATAD3BQ5T9A4 648 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 HBMQ6B0K9 141 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 TTC23LQ6PF05 361 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 UQCC3Q6UW78 93 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 ZYG11AQ6WRX3 759 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 LINC00322Q6ZN03 302 aaPredicted RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 Q6ZRU5 148 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CTAGE6Q86UF2 777 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 LRRC28Q86X40 367 aaPredicted RBP1.32□□□□□ -2.2
ITGA6-209ENST00000470259 C17orf78Q8N4C9 275 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 OR56B2PQ8NGI1 322 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 CAPSLQ8WWF8 208 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 SEH1LQ96EE3 360 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 COQ2Q96H96 371 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 NDEL1Q9GZM8 345 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 OR51B6Q9H340 312 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 PARP11Q9NR21 331 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 PRTFDC1Q9NRG1 225 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 TAAR3PQ9P1P4 343 aa1.32□□□□□ -2.2
ITGA6-209ENST00000470259 MDN1Q9NU22 5596 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 TRAV26-1A0A087WT03 109 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 TRAV10A0A0B4J240 114 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 F8VZ95 297 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 LY6LH3BQJ8 138 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 FGGP02679 453 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 OR5H8P0DN80 308 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 GZMAP12544 262 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 F2RP25116 425 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RPA3P35244 121 aaPredicted RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 TAGLN2P37802 199 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RPL26P61254 145 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RPL37AP61513 92 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 ACTG2P63267 376 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 MXD1Q05195 221 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 STX4Q12846 297 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 CHIT1Q13231 466 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 PDK3Q15120 406 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 ZMYND11Q15326 602 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 ARHGAP11BQ3KRB8 267 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 LPCAT4Q643R3 524 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 STUMQ69YW2 141 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 NIPAL1Q6NVV3 410 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 FAM151BQ6UXP7 276 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RUFY3Q7L099 469 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 VMO1Q7Z5L0 202 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 UMODL1-AS1Q8N2C9 162 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 ZCCHC7Q8N3Z6 543 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 EIF1ADQ8N9N8 165 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 Q8NDZ9 215 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 OR52M1Q8NGK5 317 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 OR2V1Q8NHB1 315 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RHEBL1Q8TAI7 183 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 HGDQ93099 445 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 APH1AQ96BI3 265 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 GPR21Q99679 349 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 EBNA1BP2Q99848 306 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 C1orf50Q9BV19 199 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 AICDAQ9GZX7 198 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 VCX2Q9H322 139 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 NCOR1P1Q9H4R4 102 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 LRRC40Q9H9A6 602 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 CRLF2Q9HC73 371 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 DDX18Q9NVP1 670 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 NMRK1Q9NWW6 199 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 PITPNC1Q9UKF7 332 aa1.31□□□□□ -2.2
ITGA6-209ENST00000470259 RPL26L1Q9UNX3 145 aaKnown RBP1.31□□□□□ -2.2
ITGA6-209ENST00000470259 ST3GAL6Q9Y274 331 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms